Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 321 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 77/283 (27%), Positives = 129/283 (45%), Gaps = 14/283 (4%)

Query: 12  FGLTAVGAMAQTVVGVSWSNFQEERWKTDEAAIKAELEKLGAKYISADAGGSPEKQLGDI 71
           F LT+     +  VG++  +     +    AA++   +  G +  +AD+     KQ+ D+
Sbjct: 15  FCLTSAAMAEECKVGLTMPSLNAPYFAAQVAAVEKAAKDQGCEITTADSQNDFSKQINDV 74

Query: 72  EGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLI--EAPGVFYITFDNVEVG 129
           E +++KG   LI+   D++A++PA   AT+  V VV  D  +  +A  V  +   N E G
Sbjct: 75  EDMIAKGIDILILNPRDQEALVPAADAATKAGVKVVVMDSTLNPKANVVTQVRSSNEENG 134

Query: 130 RMEAREVLKVKPKG---NYVIIKGSPSDPNADFLRAG--QQEVLDASIKKG--DIKIVGD 182
           R+    + K K KG     +++ G+  +P     R G  +  V    + +G  +++I+G 
Sbjct: 135 RLVGDWIAK-KMKGTPIKMLLLSGNQGNPGGLDRRMGVIKGIVEGQLVNEGAVNLQILGQ 193

Query: 183 EYTEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGAVAALTAKGLRGIP-VSGQDA 241
            + + W  +   K  E +   + +  + VV  ND    GAV A  A GL GI   +  D 
Sbjct: 194 GWGD-WATDGGLKAAEDLFQAHPD-ANLVVGENDSMVLGAVQAAKAAGLDGILFAAAADG 251

Query: 242 DFAALNRIALGTQTATIFKDSRELGREAAIAAIALSQGK-PVD 283
              AL  +  GT  AT   D   +GR A   A    +G+ P D
Sbjct: 252 QREALEMVKEGTYGATGLNDPDLVGRTAFDIAYKAFKGELPAD 294