Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 327 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 17/252 (6%)

Query: 43  AIKAELEKLGAKYISADAGGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQ 102
           ++KAE EKLG + +  DA GS  KQ+ D+  ++++G   + +   ++  ++PAV  A + 
Sbjct: 59  SMKAEAEKLGHQLVYTDAAGSAAKQVADVNSMIAQGVDLIFLAPREEKPLIPAVMAAKKA 118

Query: 103 KVPVVAYDRLIE----APGVFYITF---DNVEVGRMEAREVLK-VKPKGNYVIIKGSPSD 154
            +PV+  DR ++      G  Y+TF   D +E G+  A  ++K    K   + ++G+   
Sbjct: 119 GIPVILLDRSVDPSLAKAGEDYVTFIGSDFIEEGKRIAEWLVKNANGKSKIIELEGTTGS 178

Query: 155 PNADFLRAGQQEVLDASIKKGDIKIVGDEYTEGWKPEVAQKNMEQILTKNGNKVDAVVAA 214
             A+  + G  E + A+   G  +IV  +  +  + +  Q  + + L +     D V A 
Sbjct: 179 SPANDRKKGFDETIKAA---GGFEIVASQSGDFARDKGRQ--VAEALLQAHPDADIVYAH 233

Query: 215 NDGTAGGAVAALTAKGL---RGIPVSGQDADFAALNRIALGTQTATIFKDSRELGREAAI 271
           ND  A GA+AA+ A G    + + V   D    A+  +  G + A + + +   G +A  
Sbjct: 234 NDEMAIGAIAAIEAAGKVPGKDVLVLSIDGGKEAVQAVIDG-KIAAVVECNPRFGPKAFE 292

Query: 272 AAIALSQGKPVD 283
             +  ++G+ +D
Sbjct: 293 TMLRYAKGEKID 304