Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 355 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  139 bits (351), Expect = 8e-38
 Identities = 115/346 (33%), Positives = 170/346 (49%), Gaps = 30/346 (8%)

Query: 8   AAMAFGLTAVGAMAQT--VVGVSWSNFQEERWKTDEAAIKAELEKLGAKYISADAGGSPE 65
           AA+     A  A+AQ   +VG+S       RW +D   ++   ++ G       A     
Sbjct: 11  AAITVAGFAAPAVAQEKGMVGISMPTKTSTRWISDGETMEKLFKEAGYTPDLQFADDDIP 70

Query: 66  KQLGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLIEAPG--VFYITF 123
            QL  IE +++KGAK L++ A+D   +   + KA    V V+AYDRLI   G   +Y TF
Sbjct: 71  NQLAQIENMVTKGAKVLVIGAIDGTTLSDILQKAADAGVKVIAYDRLIRDSGNVDYYATF 130

Query: 124 DNVEVGRMEAREVLK-------VKPKGNYVIIKGSPSDPNADFLRAGQQEVLDASIKKGD 176
           DN +VG ++A  +++        +PK N  +  GSP D NA F   G   VL   I  G 
Sbjct: 131 DNFQVGVLQATSLVEGLKLDSATEPK-NVELFGGSPDDNNAFFFYDGAMSVLQPLIDSGK 189

Query: 177 IKIVGDEY------TEGWKPEVAQKNMEQILTK--NGNKVDAVVAANDGTAGGAVAALTA 228
           I +   +       T  W   VAQ  ME +L+      KVD V++  DG + G ++AL  
Sbjct: 190 IVVKSGQMGMDQVGTLRWDGAVAQARMENLLSSAYTDAKVDGVLSPYDGLSIGIISALKG 249

Query: 229 KGLRG--IP---VSGQDADFAALNRIALGTQTATIFKDSRELGREAAIAAIALSQGK--P 281
            G     +P   V+GQDA+  ++  I  G Q +T+FKD+REL +       A+  GK   
Sbjct: 250 VGYGSGDMPMPIVTGQDAELPSVKSILAGEQYSTVFKDTRELAKVTVNMVNAIMDGKEPE 309

Query: 282 VDKAATWNSGPKKVSLQSRLLTPVPVTRDNL-DVVVKAGWIKKDEL 326
           V+   T+ +G K V   S LL PV V + N  DV+V +G+  +D+L
Sbjct: 310 VNDTKTYENGVKVV--PSYLLKPVSVDKSNAKDVLVGSGYYTEDQL 353