Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 72/240 (30%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 56  ISADAGGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLIEA 115
           I  D     EKQ+ D+E L+ +   AL+V   +   +   V +A   K+PV   DR +E 
Sbjct: 69  IITDGEDRTEKQVADVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVET 128

Query: 116 PG-VFYITFDNVEVGRME---AREVL--KVKPKGNYVIIKGSPSDPNADFLRAGQQEVLD 169
                ++  DN  +GR     A E+L  K K +GN V I G      A     G  E  D
Sbjct: 129 DQYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRHDGFHEFTD 188

Query: 170 ASIKKGDIKIVGDEYTEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGA-VAALTA 228
              K+  IK + D+ +  WK + A   M   L +N  K+D V   ND  A GA +AA  A
Sbjct: 189 ---KEPGIKNLLDQQSGDWKQDQAYNIMATAL-RNNEKIDLVYGHNDPMAYGAYLAAKDA 244

Query: 229 KGLRGIPVSGQDA-DFAALNRIALGTQTATIFKDSRELGREAAIAAIALSQGKPVDKAAT 287
              + +   G DA     +  +  G  TAT    +   G E    A+   +G+ V+K  T
Sbjct: 245 GREKEMKFIGIDALPNEGVTWVNNGELTATFLYATP--GAEGLRQAVKFLKGEKVEKTVT 302