Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 313 a.a., sugar ABC transporter from Sinorhizobium meliloti 1021

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 8/256 (3%)

Query: 8   AAMAFGLTAVGAMAQTVVGVSWSNFQEERWKTDEAAIKAELEKLGAKYISADAGGSPEKQ 67
           AA+    +AV A A  ++ +   +     +K +    +A+ ++LG + +         KQ
Sbjct: 13  AAVLAASSAVPAYAADLIAIITPSHDNPFFKAEAVGAEAKAKELGYETLVLVHDDDANKQ 72

Query: 68  LGDIEGLMSKGAKALIVLAMDKDAILPAVTKATRQKVPVVAYDRLIEAPG--VFYITFDN 125
              I+  + +GAKA+I+     +A + AV KA    VP    DR I A G  V  I  +N
Sbjct: 73  SQLIDTAIGRGAKAIILDNAGSEASIAAVQKAKDAGVPSFLIDREINATGVAVSQIVSNN 132

Query: 126 VEVGRMEAREVLKVK-PKGNYVIIKGSPSDPNADFLRAGQQEVLDASIKKGDIKIVGDEY 184
            +  ++ A E +K+    GNYV + G  +D NA     G  +V+D   +  ++K+V  + 
Sbjct: 133 YQGAQLGAEEFVKLMGESGNYVELLGREADLNAGIRSKGYHDVID---EYPEMKMVAQQ- 188

Query: 185 TEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGAVAALTAKGLRGIPVSGQDADFA 244
           +  W        ME IL  N + +  V++ ND  A GA+AAL A G + + V G D    
Sbjct: 189 SANWSQTEGYSKMETILQANPD-IKGVISGNDTMAMGAIAALQAAGRKDVIVVGFDGSND 247

Query: 245 ALNRIALGTQTATIFK 260
             + I  G   AT+ +
Sbjct: 248 VRDSIKSGGIKATVLQ 263