Pairwise Alignments

Query, 340 a.a., D-xylose ABC transporter, substrate-binding protein XylF from Variovorax sp. SCN45

Subject, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 78/298 (26%), Positives = 138/298 (46%), Gaps = 39/298 (13%)

Query: 3   LKHTLAAMAFGLTAVGAMAQTV-----------VGVSWSNFQEERWKTDEAAIKAELEKL 51
           +KH L+A    L A  A A+ V           + +  +  Q++  K D   ++ E    
Sbjct: 1   MKHLLSAAVLALFAGSAHAENVGITIARSDSAFLTILRNGMQDQAAKLDGVTVQVE---- 56

Query: 52  GAKYISADAGGSPEKQLGDIEGLMSKGAKALIVLAMDKDAILPAVTK-ATRQKVPVV--- 107
                  DA     +QL  ++  +S G  A+IV+A+D D+  PA+TK AT   +P+V   
Sbjct: 57  -------DAQNDTSRQLDQVQNFVSSGVDAIIVVAVDGDS-TPALTKMATDAGIPIVYAN 108

Query: 108 ----AYDRLIEAPGVFYITFDNVEVGRMEAREVLK-VKPKGNYVIIKGSPSDPNADFLRA 162
                 D+L E     ++  + ++ G +E +EV + +  KG   ++ G P + ++   R 
Sbjct: 109 HPPADVDKLPETAA--FVGSNEIDSGTLETKEVCRLLGGKGAAYVLMG-PLNNHSSLTRT 165

Query: 163 GQQEVLDASIKKGDIKIVGDEYTEGWKPEVAQKNMEQILTKNGNKVDAVVAANDGTAGGA 222
                + A+ +   + ++ +E +  W    A   M   L+  G + +A++A ND  A GA
Sbjct: 166 KDIHDVIATDECKGMSVI-EEQSANWDRLEAANIMTNWLS-TGREFNAIIANNDEMAIGA 223

Query: 223 VAALTAKG--LRGIPVSGQDADFAALNRIALGTQTATIFKDSRELGREAAIAAIALSQ 278
           + A+ A G  +  + V G DA    L  +A G    T+F+++   G  A  AA+ALS+
Sbjct: 224 IQAMKAAGVDMSKVVVGGIDATPDGLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSR 281