Pairwise Alignments

Query, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 2e-40
 Identities = 86/261 (32%), Positives = 144/261 (55%), Gaps = 5/261 (1%)

Query: 3   LLTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADPYFREVLSTT 62
           ++TL    +VL +++ P  M++  S        L+  AFT  NY ++  DP + +V+  +
Sbjct: 12  IVTLIVGWLVLFVLI-PNLMIIGTSFLTRDEANLIKFAFTFENYTRLL-DPLYGKVMLHS 69

Query: 63  LQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSG 122
             +A V TLI L++G P  Y +A+MP +W+ ++    I+P    +++R+ G   +LG  G
Sbjct: 70  FYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRTYGLKIVLGTQG 129

Query: 123 LFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLG 182
           + N      GL+  P+++MF   AV+  +V I+LP M++ L S IE +     EAA +LG
Sbjct: 130 ILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLG 189

Query: 183 ARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFVGLN 242
           A  F    RV+LP  MPG+I G  LV +  +  +    L+GG +  ++   I  Q +   
Sbjct: 190 ANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNAR 249

Query: 243 NWPFGAALAFMLLAVTLAVVL 263
           +WPFGAA +   +A+TLA+ +
Sbjct: 250 DWPFGAATS---IALTLAMAI 267