Pairwise Alignments

Query, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 286 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (340), Expect = 1e-36
 Identities = 81/266 (30%), Positives = 144/266 (54%), Gaps = 1/266 (0%)

Query: 4   LTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADP-YFREVLSTT 62
           L  PA+  +L  +  PM  + R S N       +VEA T  NY +   +P Y    L  +
Sbjct: 8   LLSPALLALLLFVAFPMVWVFRTSFNELAEGAYIVEAMTLENYTRFLTEPWYLVNTLWFS 67

Query: 63  LQVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSG 122
           +++A + T I+++   P    +A+     +  L   T+ PL++G V    GW+ +    G
Sbjct: 68  VRIALLATAISVICAYPVALYIAKTSGLQRNVLMALTMAPLLIGLVTLVYGWIVIFRGGG 127

Query: 123 LFNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLG 182
           L N++     +  +P++ M++   VV ++V I  P +V++L   IE I   + EAA N+G
Sbjct: 128 LMNSLMIALRVYDQPVRYMWDIKGVVILLVYIGTPYIVLSLLDSIERINPFLVEAARNVG 187

Query: 183 ARPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFVGLN 242
           A  +T F ++V P + PG+ AG+ +VF L   A+A P++IG    +M+   IY++ +  N
Sbjct: 188 ANRWTAFWKIVFPLSTPGLYAGLVIVFSLNFAAFAVPLMIGDSNTQMIGLVIYREALLNN 247

Query: 243 NWPFGAALAFMLLAVTLAVVLGIGAL 268
           + PF +AL+ ++++V   ++LG+ AL
Sbjct: 248 DLPFASALSVIMVSVNALLILGMSAL 273