Pairwise Alignments

Query, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 296 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  169 bits (427), Expect = 9e-47
 Identities = 92/260 (35%), Positives = 145/260 (55%), Gaps = 10/260 (3%)

Query: 4   LTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADPYFREVLSTTL 63
           L  P +A +LA  + P+A L+  S +            T  +Y ++F +P   EVL +T+
Sbjct: 31  LVTPLLAAMLAGFLYPVARLIALSFS----------GGTFSHYRRIFTEPLHLEVLFSTI 80

Query: 64  QVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSGL 123
           +VA V T+  LL+G P  Y +AR+ R   M +     +PL    ++RS  W+ LL  +G+
Sbjct: 81  EVAFVVTVAGLLLGFPVAYLMARLSRGLAMAVAACVFVPLWTSVLIRSYAWVVLLQRNGI 140

Query: 124 FNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLGA 183
            N +   +G+   P++L++ + AV+  M  +++P M++ + S +  +P +   AA NLGA
Sbjct: 141 VNKLLADTGVTEGPLKLIYTQGAVILAMTHVLMPFMILPIYSALRALPPDYVRAARNLGA 200

Query: 184 RPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFVGLNN 243
            P   F  V LP ++PG+ AG  + F+L +  Y TP L+GGP   +M   I QQ   L +
Sbjct: 201 GPIRAFVTVTLPLSLPGIFAGSVMCFVLALGFYITPALVGGPSSMLMATLIGQQTTVLLD 260

Query: 244 WPFGAALAFMLLAVTLAVVL 263
           WPF AAL+ +LLAVTL  VL
Sbjct: 261 WPFAAALSTVLLAVTLLFVL 280