Pairwise Alignments

Query, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (364), Expect = 2e-39
 Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 10/259 (3%)

Query: 4   LTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADPYFREVLSTTL 63
           LTLPA+ +++   V P+AMLL  S+    P           NY ++     +  + + T 
Sbjct: 26  LTLPALGLLILFFVLPVAMLLTRSVTEPVPGL--------GNYAELLGSSTYLRIFANTF 77

Query: 64  QVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSGL 123
            V+++ TL++LL+G P  + LA MP R    +    +L +    + R+  W+ LL  +G+
Sbjct: 78  IVSSLVTLVSLLIGFPVAWALAIMPSRAASIVFAILLLSMWTNLLARTYAWMVLLQRTGV 137

Query: 124 FNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLGA 183
            N +    GL+  P+ L+ N   V   M  I+LP +++ L  VI  I   + +AAA  GA
Sbjct: 138 INKMLLGMGLIDTPLPLVNNLTGVTIGMTYIMLPFIILPLYGVIRKIDPAILQAAALCGA 197

Query: 184 RPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFV-GLN 242
             +    RV+LP AMPG+ AG  +VF++ +  + TP L+GG    MM  E+  QFV  L 
Sbjct: 198 NRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTS-NMMLAELIAQFVQSLV 256

Query: 243 NWPFGAALAFMLLAVTLAV 261
           NW  G A A +LL VTLA+
Sbjct: 257 NWGMGGAAALVLLVVTLAL 275