Pairwise Alignments

Query, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 283 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  131 bits (329), Expect = 2e-35
 Identities = 80/258 (31%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 4   LTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADPYFREVLSTTL 63
           L  PA+  +    + P+  ++  SL+              +N+ ++     F  VL  T 
Sbjct: 16  LMAPAVIFLALFFLVPLGYVIWMSLS--------QPVIGLQNFGRLLNSSLFASVLYNTF 67

Query: 64  QVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSGL 123
           + A + TL++LL   P  Y  A   +R+  +L     L      +VR+  W+ +LGN G 
Sbjct: 68  KTALLVTLLSLLFAYPLAYAAANGSKRFATFLLTVVALSFWTSYLVRTYAWMVILGNQGP 127

Query: 124 FNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLGA 183
             A+  W G    P +++F   +    M   ++P M M+L +V++ I      AA NLGA
Sbjct: 128 VTALLSWFGWDPTP-KILFTTFSATLAMTHALIPFMTMSLFAVMKRIDPLYVRAAENLGA 186

Query: 184 RPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFVGLNN 243
            PF  F  V LP + PG++ G +LVFI C+  Y  PVL+G PR +M+   I  Q     +
Sbjct: 187 HPFRAFVSVYLPLSAPGIVNGCTLVFITCLGFYVMPVLLGSPRDQMIAGIIGDQIEQTLD 246

Query: 244 WPFGAALAFMLLAVTLAV 261
           +  G+A++ +LLA+TLAV
Sbjct: 247 FGLGSAISIVLLALTLAV 264