Pairwise Alignments

Query, 345 a.a., no description from Variovorax sp. SCN45

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 60/297 (20%), Positives = 120/297 (40%), Gaps = 17/297 (5%)

Query: 11  LLAAASLPLAASAPAFAAVGGRVVIATWGGDYGDLLGKNVEQPLLKPRGIEAVQSTDDGP 70
           LLA ++  L+  +   AA    +V   WG      +   + +   K  GI+ + ST +  
Sbjct: 7   LLAGSACALSLLSGTAAAEDKELVFMNWG----PYINSGILEQFTKETGIKVIYSTYES- 61

Query: 71  PRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLTDANVPNARNAIAA-LRQPQ- 128
                L A+  +     D+V    +  + +   G+ + +  + + N +N  +  L +P  
Sbjct: 62  --NETLYAKLKTHNQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYD 119

Query: 129 -----AVPHVYSGLVIAYNPDKIRTPP-KSFNDLWDPKYKGRVGLAEILFP-YNIAAASL 181
                ++PHV +   +A N D       +S+ DLW P+ KG++ L +     ++IA   L
Sbjct: 120 PNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWKPELKGQLMLMDDTREVFHIALRKL 179

Query: 182 AAGGTLSDLAPGMKKLGEMKALSPKIFATN-EAVAQALKSEDIWITLAWRARVYQWRRAG 240
              G  +D     +   E++ L P +   N +  A    S ++ + + W       ++ G
Sbjct: 180 GYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAAAAQKEG 239

Query: 241 VSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFAYLDAMLDARAQAAFAERMGYVPTV 297
           + +    P EG +    +  +   ++  D A   +D +L        +   GY+  V
Sbjct: 240 LPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLTGV 296