Pairwise Alignments

Query, 345 a.a., no description from Variovorax sp. SCN45

Subject, 366 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 88/346 (25%), Positives = 132/346 (38%), Gaps = 46/346 (13%)

Query: 5   STRRSLL--LAAASLPLAASA---PAFAAVGGRVVIATWGGDYGDLLGKNVEQPLLKPRG 59
           +TRRS L  LAA +  LAA A   PAF+    +VV  T    Y   + ++      K  G
Sbjct: 6   ATRRSTLKFLAAGTGVLAAPAIIRPAFSQ--SKVVNIT---TYDKFVPQSFIDQFQKDTG 60

Query: 60  IEA-VQSTDDGPPRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLTDANVPNAR 118
           IE  ++ TDD   +   L AE  +   S D+V++     S      L   L    + N  
Sbjct: 61  IEVRIRLTDDQGKQYNVLSAEGETP--STDIVTVTGHRLSQFIGSKLLTPLDTGRLKNWD 118

Query: 119 NAIAALR-QPQ--------AVPHVYSGLVIAYNPDKIRTPPKSFNDLWDPKYKGRVG--- 166
              +A +  PQ         VP +     +A N D  +    S+  ++D +YKG      
Sbjct: 119 KLASAYKGAPQLTVDSSVYGVPLLAGFEGLARNTDYTKASD-SWAIMFDQEYKGLTSYII 177

Query: 167 --LAEILFPYNIAAASLAA-GGTLSDLAPGMKK----LGEMKALSPKIFATNEAVAQALK 219
               +I   Y           G   +      K    L + K +  K +     V Q   
Sbjct: 178 SDFLQITMRYQGNDGDFVTYEGKPEEAQAATNKARDYLIQNKDMVRKYYDAGSEVQQMFV 237

Query: 220 SEDIWITLAWRARVYQWRRAGVSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFAYLDAML 279
           +EDI++  +W     +    G  +  +VP EG     +S  V KN    D A+ +LDA+L
Sbjct: 238 NEDIYVAHSWSGPAAKLIMDGHPIEISVPKEGTYGFLYSFNVVKNGPNTDAAYTFLDAIL 297

Query: 280 DA-------RAQAAFAERMGYVPTVTNAR------LPAELAAQIAF 312
            +         Q+ FA     V  V N +      LP E   +I F
Sbjct: 298 SSPEIGAAMSRQSGFASAFDGVDKVLNDKERAAMTLPQEQTERIQF 343