Pairwise Alignments

Query, 358 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  261 bits (666), Expect = 3e-74
 Identities = 143/318 (44%), Positives = 201/318 (63%), Gaps = 7/318 (2%)

Query: 4   LRLDNLQCTYDRTVAVRNLNLDVAQGELLALLGPSGCGKSTTLRMVAGFVQPSAGRIFFG 63
           +RL  +  ++D    + NLNLDV  GE L +LGPSGCGK+T LRM+AGF     G+I   
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 64  EREVTHAPPHARDTGMVFQGYALFMHMSVAENVAFGLQMRKVPRAEQAARVKEALRLVRL 123
           +++VT  P   R    VFQ YALF HM+V ENVAFGL+M+KVP++E   RV EALR+VRL
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137

Query: 124 DHLADRRPAALSGGQQQRVALARALVVQPAVFLLDEPMSNLDARLRTEVRLEIRALQQRL 183
             +A R+P  LSGGQQQR+A+ARA+V +P V LLDE +S LD +LR +++ E++ LQ++L
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197

Query: 184 GLTTLLVTHDQEEALTTADRLAVMDHGRVRQVGTPRQVYEQPVDQFVANFIGRCNLVPG- 242
           G+T + VTHDQEEAL+ +DR+ VM  G++ Q G+PR++YE P + FVA FIG  N+    
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257

Query: 243 ---RLDAPGVFRAGAHALPCAPFEGLQSTKNDLALMVRPDRIR---IANAGEQGLPARVR 296
              R+D   +            +E      + L +++RP+ +R   I  + E+G+   V 
Sbjct: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGHVT 317

Query: 297 LSTYLGGTTEWNFETDVG 314
             TY G T E   E + G
Sbjct: 318 DRTYKGMTLESVVELESG 335