Pairwise Alignments

Query, 358 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 374 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit from Pseudomonas syringae pv. syringae B728a

 Score =  263 bits (673), Expect = 4e-75
 Identities = 158/362 (43%), Positives = 210/362 (58%), Gaps = 33/362 (9%)

Query: 9   LQCTYD-RTVAVRNLNLDVAQGELLALLGPSGCGKSTTLRMVAGFVQPSAGRIFFGEREV 67
           +Q +YD   + V++LNLD+ +GE L LLGPSG GK+T+L M+AGF  P+AG I  G R +
Sbjct: 20  VQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLGGRAI 79

Query: 68  THAPPHARDTGMVFQGYALFMHMSVAENVAFGLQMRKVPRAEQAARVKEALRLVRLDHLA 127
            + PPH RD GMVFQ YALF HM+VAEN+AF L +R + + +   +VK+AL +V+LD  A
Sbjct: 80  NNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVGEKVKKALGMVQLDTFA 139

Query: 128 DRRPAALSGGQQQRVALARALVVQPAVFLLDEPMSNLDARLRTEVRLEIRALQQRLGLTT 187
            R PA LSGGQQQRVALARALV +P + L+DEP+  LD +LR  +++EI+ L QRLG+T 
Sbjct: 140 HRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTV 199

Query: 188 LLVTHDQEEALTTADRLAVMDHGRVRQVGTPRQVYEQPVDQFVANFIGRCNLVPGRLDAP 247
           + VTHDQ EALT +DR+AV   G ++Q+  PR +YE+P + FVANFIG  N + GRL + 
Sbjct: 200 VYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNTFVANFIGENNRLNGRLVSQ 259

Query: 248 GVFRA--------GAHALPCAPFEGLQSTKNDLALMVRPDRIRIANAGE---QGLPARVR 296
              R           HAL       +      + L +RP+RI +    E        RV 
Sbjct: 260 DGDRCVVELERGEKVHALAI----NVGQPGGPVTLSIRPERINLNGRSESCANRFSGRVA 315

Query: 297 LSTYLGGTTEWNFETD-------VGPIAVAQPSTLAHGTGARGPAEGERVSLQWSPEHAL 349
              YLG       E           PIA   P          G + G+ V + W  EH  
Sbjct: 316 EFIYLGDHVRVRLEVAGKHDFFVKQPIAELDP----------GLSVGDVVPIGWQVEHVR 365

Query: 350 AL 351
           AL
Sbjct: 366 AL 367