Pairwise Alignments

Query, 1255 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1354 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  337 bits (864), Expect = 4e-96
 Identities = 339/1337 (25%), Positives = 559/1337 (41%), Gaps = 161/1337 (12%)

Query: 1    LLSLLAFW-AIAWLAVPPILKSQLQKIASEKLGRQVTVGKVDFKPWTLELTLNDLRIATA 59
            LL L  FW  I  L +PP+++S+L++  ++ L    TV KV   P+TL + +  +++  A
Sbjct: 35   LLGLYIFWLVIGGLVLPPVVRSELERTMAQHLRATCTVEKVTINPFTLRIRVLGVKVPDA 94

Query: 60   DGSKPQVAIQRIYADAELQSVFRLAPVIDAVTIDAPAILLTHQADGKYDIDDILAKLSSG 119
             G       + +       ++FRLAP + +  +  P + +T+  +G++   DI+    S 
Sbjct: 95   SGEGVLFGFRELSIAPSPAALFRLAPSLASARLVEPVVDITYFGEGRFSFSDIVPP--SE 152

Query: 120  PPADPNAKPA-RFAIYNIAINGGSVDFDDQTVKRRHELRDFVLKVPFLSNLDSKRDVNTE 178
               D  A P   F I +  +  GS  F D+     H + D    VPF S+LD  RD    
Sbjct: 153  ATTDDKATPVFPFVISDFELVDGSFIFRDEPRGVTHTIADIDFIVPFTSSLDMFRDTPIT 212

Query: 179  PKLAFVLNGSKFDSGALTTPFAESRKTDARVQFKGLDLVPYLGYIPGGLPVRLQAGS--L 236
            P L   ++GS+        PFAE+++T+  +  + + L  +  Y+    P+RL+ G   L
Sbjct: 213  PSLNATVDGSRMTVAGRLLPFAETQRTEFDIATEDVALEQFKAYLAPFTPLRLEQGKARL 272

Query: 237  DADLKIGFEHGATNGLKISGTVEAHTTKVADARGRDLLAFESLKLALDDVRPLESVFHLS 296
            + DL +         L + G +      +    G+   A    +L L      E    L 
Sbjct: 273  ELDLLVERLPSGQVELGLGGALRLSDILLNTPDGKKAAALREAELRLHKFTLAERRVELE 332

Query: 297  EVALVNPQLAVARDAAGQLNL-----------------------------LATDPATGA- 326
               +    +   RD  G ++                                T  ATGA 
Sbjct: 333  SATVDGLYVKAVRDTDGTVDWQRWISPASGKAAPVTPATSRTAMQNATVSAMTQNATGAA 392

Query: 327  --------TEKAAALPAAPATP-----------------AAGQPAEKPVLKVQVDKIALS 361
                    T+KA+A   A  TP                 +A   A+     V+   + LS
Sbjct: 393  SMPASATATDKASAKNPAGGTPPVAATSGSSPEGHSTGKSAAPTADSKAFIVEGAALHLS 452

Query: 362  GGRIGWRDETVKPTAAVDVTELGLDVTAVIWPMDKPAQFSGSTAIAGAS-LKFKGSATDK 420
               + W D ++  T  + VT L + +       +K   F+ +  + G       G AT  
Sbjct: 453  DATLVWHDASLSGTREIAVTGLDVQIPRFSTGDNKTMPFAITFGLNGQGRFHVDGEATLS 512

Query: 421  MADVETEVDA--LPLSLAAPYLAQSLEPTLDGKLSGQIDISW-AQPDLKFKARR--LAAD 475
               V   +D+  LPL+ A P+   +    + G   G+  + + + P L+       L  D
Sbjct: 513  PLKVSAAIDSTGLPLAAARPFAGGTPASDIAGSFGGRAKVVFQSSPALQLTVSEGALMVD 572

Query: 476  GLALT-QAKTALA-SVGRFELIDAEADMTKHTLNVASFTATNPKVRI------------- 520
             LAL  Q K   A  V    L     D  K ++  A    T+P V +             
Sbjct: 573  DLALAAQGKQGHALGVKHIGLKGLAVDYGKQSIRAAVLALTSPSVNLILGDDGLPLLPAS 632

Query: 521  ----ERDNEKRWMFERWLKTPA-GGGTKEAEAKVAAPKPAAAEAPQPGANTKPWALTVGK 575
                + D  K+   +R  +     G + + E+K    +  A       A+T  W L +  
Sbjct: 633  AGDSQPDTGKKVKGDRQRRAQGKAGSSTKVESKARGTQEKARRGDTKTADTD-WNLVLDS 691

Query: 576  LAIDNGALSYADKASATPVTMEVTAFKLLAQKIAPETNTVSPLEVSGRIGSGRSDPGRFD 635
            L +D G ++  ++ +  P T++V+  ++    ++P+     P + S R        G+  
Sbjct: 692  LELDGGTVNITERGAKAP-TLQVSDLRVRTGALSPDLTQRLPFDASMRW----QKDGQLA 746

Query: 636  YKGNVVLKPLAAEGRLEVASFPAHAFKAYYADALNVDIRRAFAS-------YRGTVHYTT 688
             KGNV ++PL  +  +          KA   D   +DI  A ++         G V    
Sbjct: 747  LKGNVRIRPLDLDLNV----------KATKVDLAPLDIPLAMSTAMQAGGRLSGDVRLGA 796

Query: 689  TPAGMSIKL--AGDTALDDFRANSVSLTQSPGFDRNTNQLLSWKTLSLRGLQVSMAPNAA 746
               G  I++  +G T LDD R              +   L+S + L++R  +   +P   
Sbjct: 797  RERGDDIQMTASGRTQLDDARLRRRG---------DRRDLISLRRLAVRDFRYGSSPLR- 846

Query: 747  PTVDVRETTLTDFFARVIVDPTGRLNLLSLTKKGEAEATAAAAAAGE---ASTRKGPGGT 803
              V++ +  L      +++   G  N+L       AE  AAA    E   A+ R    GT
Sbjct: 847  --VEIGDILLDRPQVFLVLHKDGTTNVLRALDPEGAERRAAAIRTAEKAKAAERAKKQGT 904

Query: 804  TTTTTARA--------PAQRSTGRAVSAEEMVGGAPEPAKPVATAAATPAPAAADTGLAP 855
             T   A +        PA  + G   +AE    GA         ++A  A A A   L  
Sbjct: 905  QTGAEASSGLASKPVSPAPVAAG-GTTAEADASGADASGAGADASSAAGARAEAPASLFD 963

Query: 856  VINFGPMSLVNGKIDFTDLFVKPNYSADLSELTGKLSSFSSNPPKGEGGRPALADLELRG 915
                G +++  GKI F D    P +   L ++   ++ F+  P   E      A   L G
Sbjct: 964  RFTLGEVTVRGGKIAFRDERFSPAFDTSLDKVDAAVTGFTMAP---ESRAEVSAGGTLEG 1020

Query: 916  KAQQTAALEITGKLNPLVKPIELDITAKMRDLDLAPLSPYSVRYAGHGIERGKMSMDVNY 975
                   +++TG LNP+  P   DI   M  LDL P+SPY+++Y  + +++G+++  +  
Sbjct: 1021 -----VPVKLTGTLNPVSTPPFADIVFSMEGLDLVPVSPYALQYIAYPVDKGRLTARLQL 1075

Query: 976  KVAADGQLTATNKLVLNQLQFGDEVAGAPA-SLPVKLAVALLADRNGVIDVDLPLSGSLN 1034
            + + +  L+A +K +L  ++ GD+ +   A   PVKL +ALL   +G + +DLP+ G L+
Sbjct: 1076 QTS-EWVLSADSKFLLEDIELGDKDSRPDAPDYPVKLGLALLRGLDGNVSIDLPVRGRLD 1134

Query: 1035 DPQFSVGPLIWKAVVNLIVKAVTAPFSLLTGGL---GGGSGESSAITFDAGSSDLSAAAK 1091
            DP F +G ++ +AV+NL+VK VT+PF+L+   +   GGG  +   + F+ G   LS  A+
Sbjct: 1135 DPNFRLGGVVVQAVMNLMVKVVTSPFALVGSVVRLAGGGGQDMRNVPFEPGRETLSERAE 1194

Query: 1092 ESLDKVAKALTDRPTLQMTVVGTASLEKERDAYQRQRVRQLTLAEKRRVAV-----RGGQ 1146
              L  VA+ L  RP L + V G         A   Q +R++ L  + + A      RG +
Sbjct: 1195 AQLASVAEVLRQRPGLSLEVRGMVD-----PATDGQGLREVALLRRMQEAKYASLWRGER 1249

Query: 1147 TGTDVPPVT--DAEYPELLTAVYKRADITKPRNLVGLAKDLPLKDMENLLFASVPVDEES 1204
              T V  +T  D EY +LL +VYK A   KPRN++GL KD P + ME   +  V V ++ 
Sbjct: 1250 AKTAVEAITIEDDEYDDLLESVYKDAPFDKPRNVLGLVKDQPREVMEKAFYEHVDVTDDD 1309

Query: 1205 MRQLAVERGAAVRDYLL 1221
            +  LA +R  AVRD LL
Sbjct: 1310 LTALAQQRARAVRDRLL 1326