Pairwise Alignments

Query, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (449), Expect = 9e-49
 Identities = 159/560 (28%), Positives = 250/560 (44%), Gaps = 64/560 (11%)

Query: 25  DLPELQLPDQLNLVEELLDKATAKGFGDNPMLRSPQGTLTYSQAAVEVNRIAQVLTEDLG 84
           D+PE   PDQ   + E+ +++  K + D P   +    +T+ +        A  L  DL 
Sbjct: 12  DVPETINPDQYPSLVEMFEQSVHK-YADQPAFMNMGAVMTFRKLEERSRAFAAYLQNDLK 70

Query: 85  LVPGNRVLLRGGNSVAMALAWLAVVKAGLIAVATMPLLRSKELGEIIEKAQPVAALCDGR 144
           L  G+RV L   N +   +A   V++AG+IAV   PL   +EL   +  A   A +    
Sbjct: 71  LKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSN 130

Query: 145 LLDEL----ATAQREHPVLA-----------TVIAF---------NQPDAPDSLSSRAAK 180
             + L    A  Q +H VL            T++ F          + D P ++S R A 
Sbjct: 131 FANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKAL 190

Query: 181 KSG---VFTACPTAADDIALLAFTSGTTGKPKAPVTTHRDVLAMCETWPRHVLKARSD-- 235
             G    +     + +DIA L +T GTTG  K  + THR+++A       +VL+A+    
Sbjct: 191 HKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVA-------NVLQAKGAYG 243

Query: 236 -------DIVVGSPPLAFTFGLG-GLLVFPMWAGASMYFPDAPFSPEGLVKLINQVGATI 287
                  ++VV + PL   F L    L+F    G ++   + P    G VK + +   T 
Sbjct: 244 PVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITN-PRDIPGFVKELQKYPFTA 302

Query: 288 SYTAPTFYRQMAPFVKQHGMP--SLRISVSAGEALPDATRQLWKEATGIEMLDGIGGTEV 345
                T +  +      H +   +++++V  G A+  A  + WK+ TG+ +L+G G TE 
Sbjct: 303 ITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLTEC 362

Query: 346 FHIYISAAGNEVR----RGAVGKAVPGFTAKVVDNEGNEVPHGTVGKLALQGP-VGCRYL 400
             +     GN        GA+G  VP    ++VD+ GN VP+  VG+L ++GP V   Y 
Sbjct: 363 SPL---VTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYW 419

Query: 401 DDPRQADYVKN--GWNYPGDSFVQDDDGYFFYQARADDMIITAGYNVGGPEVEDALLKHP 458
             P     V N  GW   GD    DD G      R  DMI+ +G+NV   E+ED +  H 
Sbjct: 420 QRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHG 479

Query: 459 AVAECGVIGKPDADRGMIVKAFCVLKPGQEGDAAMVK-TLQDHVKATIAPFKYPREIEFV 517
            V E   IG+ +   G +VK + V +     D ++ K  +  H +  +  +K P+ +EF 
Sbjct: 480 KVLEVAAIGQANDVSGELVKIYVVKR-----DPSLTKDEVIAHCRKHLTGYKVPKLVEFR 534

Query: 518 TALPRTETGKLQRFKLRQLN 537
             LP+T  GK+ R  LR+ N
Sbjct: 535 DDLPKTNVGKILRRVLREEN 554