Pairwise Alignments

Query, 540 a.a., Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases from Variovorax sp. SCN45

Subject, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  192 bits (488), Expect = 3e-53
 Identities = 146/470 (31%), Positives = 223/470 (47%), Gaps = 20/470 (4%)

Query: 84  GLVPGNRVLLRGGNSVAMALAWLAVVKAGLIAVATMPLLRSKELGEIIEKAQPVAALCDG 143
           G+  G+ V+L   +        L + K G +A+    +L +K++   IEKA     +C G
Sbjct: 84  GIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTTKDIVYRIEKAGLKMIVCIG 143

Query: 144 R-----LLDELATAQREHPVLATVIAFNQPDAPDSLSSRAAKKSGVFTA----CPTAADD 194
                  +DE A ++    VL   ++    D+    S    + S  FT       T  DD
Sbjct: 144 ENGVPDYVDE-AVSEINSDVLKACVSNLNNDSWIDFSKELEESSEDFTRPVGEMDTKNDD 202

Query: 195 IALLAFTSGTTGKPKAPVTTHRDVLAMCETWPRHVLKARSDDIVVGSPPLAFTFGLGGLL 254
           + +  F+SGTTG PK     H   L    T  ++      D +        +   + G L
Sbjct: 203 VLVAYFSSGTTGYPKLIQHDHEYPLGHITT-AKYWQNVEDDGLHYTVADSGWAKCIRGKL 261

Query: 255 VFPMWAGASMYFPDAP-FSPEGLVKLINQVGATISYTAPTFYRQMAPF-VKQHGMPSLRI 312
                AG +++  D   F    +++ I +   T     PT YR M    + +    SL  
Sbjct: 262 YGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCAPPTIYRFMIKQDISKADFSSLHY 321

Query: 313 SVSAGEALPDATRQLWKEATGIEMLDGIGGTEVFHIYISAAGNEVRRGAVGKAVPGFTAK 372
           +V+AGE L       + E TG+ +++G G TE      +    + + G++GK VP F   
Sbjct: 322 AVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVVSVANFTWMDPKPGSMGKPVPIFDLM 381

Query: 373 VVDNEGNEVPHGTVGKLALQG----PVGC--RYLDDPRQADYV-KNGWNYPGDSFVQDDD 425
           +   +G E   G  G+LA +     P+G    Y  DP +      +G+ + GD+  +D+D
Sbjct: 382 IKGPDGKECDVGEEGELAFKTEDGKPLGLFSGYFKDPERTKKAWYDGYYHTGDTAWKDED 441

Query: 426 GYFFYQARADDMIITAGYNVGGPEVEDALLKHPAVAECGVIGKPDADRGMIVKAFCVLKP 485
           GY ++  R DD+I ++GY +G  EVE AL+ HPAV EC + G PD  RG IVKA  VL  
Sbjct: 442 GYLWFVGRNDDLIKSSGYRIGPFEVESALISHPAVLECAITGVPDPVRGQIVKATIVLTS 501

Query: 486 GQEGDAAMVKTLQDHVKATIAPFKYPREIEFVTALPRTETGKLQRFKLRQ 535
             E    + K LQDHVK   AP+KYPR IEFV  LP+T +GK++R ++R+
Sbjct: 502 EYEASEELKKELQDHVKHNTAPYKYPRAIEFVKELPKTISGKIRRVEIRE 551