Pairwise Alignments

Query, 437 a.a., Protein translocase subunit SecY from Variovorax sp. SCN45

Subject, 442 a.a., preprotein translocase subunit SecY from Methanococcus maripaludis S2

 Score = 63.9 bits (154), Expect = 9e-15
 Identities = 81/395 (20%), Positives = 158/395 (40%), Gaps = 67/395 (16%)

Query: 74  TVFALGIMPYISASIIMQLMTYVLPTFEQLKKEGEAGRRKITQYTRYGALGLALFQS--- 130
           T+  LGI P ++A IIMQL+         L K                 +  ALFQ    
Sbjct: 73  TLITLGIGPIVTAGIIMQLLVGSELISLDLSKP----------------MNRALFQGLQK 116

Query: 131 -FSIAVALESSAGLVIAPGFGFRLTAMVS-----LTAGSMFLMWLGEQITERGLGNGISI 184
            F IA+    +   V A  FG     M +     L  G++ +++L E ++  G+G+GI +
Sbjct: 117 LFGIALCFLEALMFVGAGAFGALTPLMTAVLVFQLALGAILIIYLDEIVSRYGIGSGIGL 176

Query: 185 LIFAGIAA-------GLPNAIGGLASLVTTGAMNPIIALFI-IAVVVLVTYFVVFVERGQ 236
            I AG++        G    +    + +T G++   +   + I   +LV   VV+VE  +
Sbjct: 177 FIAAGVSQTIFVGTFGAEGYLWKFFTAMTAGSLWTALEYILPILGTILVFLVVVYVESIR 236

Query: 237 RKILVNYARRQVGNKVYGGQSSHLPLKLNMAGVIPPIFASSIIL-----------LPATV 285
            +I + + R +       G     P+K      +P I A+++             +   +
Sbjct: 237 VEIPLAHGRVK-------GAVGKYPIKFIYVSNLPVILAAALFANIQLWGMFLEKMGFPI 289

Query: 286 VGWFSTGEG----GFRWIKDVAGALRPGEPIYVLLYAAAIVFFC-----FFYTALVFNSK 336
           +G +++G       + +      +    +P++ + Y   +V FC     F+      ++K
Sbjct: 290 LGHYTSGRAVDGLAYYFSTPYGISSLTADPLHAVFYTVMMVIFCILFGLFWVETSGLDAK 349

Query: 337 ETADNLKKSGAFIPGIRPGDQT-ARYIDKILVRLTLAGAVYITFVCLLPEFLILKYNVPF 395
             A  L      I G R   ++  + + + +  +T+ G+ ++ F+    +F         
Sbjct: 350 SMAKKLGNLDMAIKGFRKSQKSIEQRLKRYITPITVMGSAFVGFLAAAADF------TGA 403

Query: 396 YFGGTSLLIIVVVTMDFMAQVQNYMMSQQYESLLK 430
             GGT +L+ V +      Q+    +S+ + S+ K
Sbjct: 404 LGGGTGVLLTVSIVYRLYEQLVQEQLSELHPSIAK 438