Pairwise Alignments

Query, 177 a.a., LSU ribosomal protein L6p (L9e) from Variovorax sp. SCN45

Subject, 176 a.a., 50S ribosomal protein L6 (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (476), Expect = 6e-53
 Identities = 93/177 (52%), Positives = 125/177 (70%), Gaps = 1/177 (0%)

Query: 1   MSRVGKMPITIPAGVDVSIKEDQISVKGTGGSLSLARNSLVKIVSNDGKLNFEPANDSRE 60
           MSRV K P+ IPAGV+V++ E  I+VKG  GSL+   N+ V +V  + ++   PA     
Sbjct: 1   MSRVAKAPVAIPAGVEVTLNEQTITVKGAKGSLTRVINADVSVVVENNEIKCSPAEGVTS 60

Query: 61  ANAMSGTIRQLVNNMVVGVTKGFEKKLNLVGVGYKAAASNNKLNLQVGYSHPVNIDMPQG 120
           A A +GT R L+NNMVVGV +GFE+KL LVGVGY+A  + N ++L +G+SHP+   +P G
Sbjct: 61  A-AQAGTARALINNMVVGVNEGFERKLTLVGVGYRAKIAGNGIDLTLGFSHPLVHQLPDG 119

Query: 121 ITVATATPTEIVIKGADRQRVGQIAAEIRAVRPPEPYKGKGIRYSDEKIVIKETKKK 177
           +T    + TEIV+K  D+Q VGQ+AAEIR  RPPEPYKGKG+RY+DE++  KE KKK
Sbjct: 120 VTAECPSQTEIVLKSTDKQLVGQVAAEIRGYRPPEPYKGKGVRYADEQVRRKEAKKK 176