Pairwise Alignments

Query, 177 a.a., LSU ribosomal protein L6p (L9e) from Variovorax sp. SCN45

Subject, 182 a.a., 50S ribosomal protein L6 from Methanococcus maripaludis S2

 Score = 64.3 bits (155), Expect = 1e-15
 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 13/176 (7%)

Query: 9   ITIPAGVDVSIKEDQISVKGTGGSLSLARNSL---VKIVSNDGKLNFEPANDSREANAMS 65
           I IP  V+V I    + VK   G+  L R  +   ++I + DGK+  E A   +   A+ 
Sbjct: 11  IEIPENVNVEINGSTVVVKS--GAKELKRELMYPGIEISTEDGKVVIECAFPRKAQTAIV 68

Query: 66  GTIRQLVNNMVVGVTKGFEKKLNLVGVGY--KAAASNNKLNLQ--VGYSHPVNIDMPQGI 121
           GT R  + NM+ GVT GFE KL +    +  K +A  N + +   +G  +     +  G+
Sbjct: 69  GTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKGNTVMIDNFLGEKYTRTAKIMDGV 128

Query: 122 TVATATPTEIVIKGADRQRVGQIAAEIRAVRPPEPYKGKGIRYSDEKIVIKETKKK 177
           TV   +  ++V+ GA+++ VGQ AA I         KG+  R   + I I E   K
Sbjct: 129 TV-KVSGEDVVVSGANKEFVGQTAANIEQA---TKVKGRDTRIFQDGIYIVEKAGK 180