Pairwise Alignments

Query, 710 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 690 a.a., ATP-dependent DNA helicase RecG from Pseudomonas stutzeri RCH2

 Score =  572 bits (1475), Expect = e-167
 Identities = 343/692 (49%), Positives = 435/692 (62%), Gaps = 30/692 (4%)

Query: 26  GAGLSQVQRALRKLGLVRDIDFALYLPMRYEDETRIVRLADTRDGDLAQVEGVVTECEVV 85
           GA L++    L ++GL    D   +LP+RY+D TR+V +   R G  A +EGVV+  ++V
Sbjct: 16  GAALAE---KLARVGLETLQDVLFHLPLRYQDRTRVVPIGALRPGQDAVIEGVVSGADIV 72

Query: 86  YRPRRQLIATIDDGSDTCQLRFFNFYPSQQKQLAVGARVRVRGEMRGGFVGRQIMHPTVK 145
              RR L+  + DGS T  LRF++F  +Q++ +  G ++R  GE R G  G +I HP  +
Sbjct: 73  MGRRRSLLVRLQDGSGTLSLRFYHFSQAQKEAMKRGTQLRCYGEARPGASGLEIYHPEYR 132

Query: 146 A-AGTALP--NALTPVYSTVAGLAQPVLRREVRSGLARA---VLDETVPVQIGFR-GAWD 198
           A  G   P    LTP+Y T  GL Q  LR      LAR     L + +P ++        
Sbjct: 133 ALTGEPAPVEQTLTPIYPTTEGLTQQRLRNLSEQALARLGPHSLPDWLPAELARDYQLGP 192

Query: 199 LRASLSFLHYPTPDVAMATLEDHSHPAWQRIKAEELLAQQLSQLQARLERAAQRAPVLPS 258
           L  +L +LH P  D  +  L +  H A  R+  EELL  QLS  + R    AQ+AP LP 
Sbjct: 193 LDQALRYLHRPPADANLEELAEGRHWAQHRLAFEELLTHQLSLQRLRERVRAQQAPALPP 252

Query: 259 PAEPLASSLHAQLLAVLPFGLTGAQQRVGEEITRDLCREIPMHRLLQGDVGSGKTVVAAL 318
                A +L  Q LA L F  TGAQQRVG EI  DL ++ PM RL+QGDVG+GKTVVAAL
Sbjct: 253 -----AKTLPQQFLANLGFAPTGAQQRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAAL 307

Query: 319 AAARAIDAGFQCALMAPTEILAAQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERDEMS 378
           AA +A++AG+Q ALMAPTEILA QHF     WL+PL    G+ VAWL G  K K R   +
Sbjct: 308 AALQALEAGYQVALMAPTEILAEQHFLNFSKWLEPL----GIEVAWLAGKLKGKAR---A 360

Query: 379 AAVE--SGEAALVIGTHAVISEKVRFKNLALAIIDEQHRFGVAQRLALRGKAV-GELEPH 435
           A++E  +G   +V+GTHA+  ++V FK LAL IIDEQHRFGV QRLALR K + G L PH
Sbjct: 361 ASLEQIAGGCPMVVGTHALFQDEVVFKRLALVIIDEQHRFGVQQRLALRQKGIDGRLCPH 420

Query: 436 LLMMSATPIPRTLAMSYYADLDVSTLDELPPGRTPIVTKLVADHRRDEVIDRIHAQIAQG 495
            L+M+ATPIPRTLAMS YADLD S LDELPPGRTP+ T ++AD RR EVI+R+     +G
Sbjct: 421 QLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTLVIADSRRLEVIERVRIACNEG 480

Query: 496 RQVYWVCPLIEESEAVDLRNATETRDELTGTLGEPIQVGLLHSRMPTAEKQAVMAAFTAN 555
           RQ YWVC LIEESE +  + A  T ++L+  L   ++VGL+H RM   EK AVM  F   
Sbjct: 481 RQAYWVCTLIEESEELTCQAAETTFEDLSAAL-VGLRVGLIHGRMKPVEKAAVMEQFKRG 539

Query: 556 EIQVLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLYAPGD 615
           E+Q+LV+TTVIEVGVDVPNASLM+IE+ ER GL+QLHQLRGRVGRG+AAS CVLLY P  
Sbjct: 540 ELQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHP-- 597

Query: 616 SGRVGEAARARLKAMAETGDGFEIARRDLEIRGPGEFLGARQSGAPLLRFADLTTDTLLL 675
              + +  R RL  M ET DGF IA +DLE+RGPGE LG RQ+G    + ADL  D  LL
Sbjct: 598 --PLSQLGRERLAIMRETCDGFLIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDAELL 655

Query: 676 DWARELAPVMLQKHPDLAQRHIDRWLGTKAEY 707
              R+ A  +L + P      ++RWL    EY
Sbjct: 656 PAVRDAAQELLARWPQHVSPLLERWLRHGQEY 687