Pairwise Alignments

Query, 710 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 692 a.a., DNA helicase RecG from Vibrio cholerae E7946 ATCC 55056

 Score =  568 bits (1464), Expect = e-166
 Identities = 335/693 (48%), Positives = 434/693 (62%), Gaps = 30/693 (4%)

Query: 30  SQVQRALRKLGLVRDIDFALYLPMRYEDETRIVRLADTRDGDLAQVEGVVTECEVVYRPR 89
           ++V   L K+GL    D   +LP+RYED TR+  +     G  A V+G V   + ++  R
Sbjct: 18  AKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVYPIVQLHHGLWAAVQGKVMAVDTLFGKR 77

Query: 90  RQLIATIDDGSDTCQLRFFNFYPSQQKQLAVGARVRVRGEMRGGFVGRQIMHPTVKAAGT 149
           + L   I DG+ T  LRFFNF  + +   A G  V   GE++ G  G +I+HP  K    
Sbjct: 78  KMLTVKISDGNGTLTLRFFNFTAAMKNNFAEGKFVHAYGEIKRGNQGLEIIHPDYKFFTP 137

Query: 150 AL-----PNALTPVYSTVAGLAQPVLRREVRSGLARAVLDETVPVQIGFRGAWD----LR 200
           A      PN LTPVY T  GL Q  LR      L   +L+++   ++   G +D    L 
Sbjct: 138 AQTPDVEPN-LTPVYPTTEGLRQLTLRNLTDQALV--LLEKSAVQELLPSGLYDQQMTLA 194

Query: 201 ASLSFLHYPTPDVAMATLEDHSHPAWQRIKAEELLAQQLSQLQARLERAAQRAPVLPSPA 260
            +L  +H P+ D+ +   E   HPA  R+  EELLAQ LS L  R    +Q    +  P 
Sbjct: 195 QALKIIHRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIR----SQGQQDVALPL 250

Query: 261 EPLASSLHAQLLAVLPFGLTGAQQRVGEEITRDLCREIPMHRLLQGDVGSGKTVVAALAA 320
            P+   L  QLLA LPF  T AQQRV  EI  DL +  PM RL+QGDVGSGKT+VAALAA
Sbjct: 251 APV-HQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSGKTLVAALAA 309

Query: 321 ARAIDAGFQCALMAPTEILAAQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERDEMSAA 380
            RAI+ G+Q ALMAPTE+LA QH      WL+P+    G++V WL G  K K R+   A 
Sbjct: 310 VRAIEHGYQVALMAPTELLAEQHALNFAQWLEPM----GIQVGWLAGKLKGKARETELAR 365

Query: 381 VESGEAALVIGTHAVISEKVRFKNLALAIIDEQHRFGVAQRLALRGKAVGE-LEPHLLMM 439
           + SGE  +V+GTHA+  E+V F +LAL IIDEQHRFGV QRL LR K   +   PH L+M
Sbjct: 366 IASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHRFGVHQRLELREKGAKQGAYPHQLIM 425

Query: 440 SATPIPRTLAMSYYADLDVSTLDELPPGRTPIVTKLVADHRRDEVIDRI-HAQIAQGRQV 498
           +ATPIPRTLAM+ YADL+ S +DELPPGRTPI T  + D +RDE+++RI HA + +G+Q 
Sbjct: 426 TATPIPRTLAMTAYADLETSVIDELPPGRTPIQTVAIPDTKRDEIVERIRHACLNEGKQA 485

Query: 499 YWVCPLIEESEAVDLRNATETRDELTGTLGEPIQVGLLHSRMPTAEKQAVMAAFTANEIQ 558
           YWVC LI+ESE ++ + A ET +EL   L E +++GL+H RM  AEKQAVM AF  NE+ 
Sbjct: 486 YWVCTLIDESEVLEAQAAAETAEELQRKLPE-VKIGLVHGRMKPAEKQAVMQAFKNNELH 544

Query: 559 VLVSTTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLY-APGDSG 617
           +LV+TTVIEVGVDVPNASLM+IE+ ER GL+QLHQLRGRVGRG  AS CVLL+ AP    
Sbjct: 545 LLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAP---- 600

Query: 618 RVGEAARARLKAMAETGDGFEIARRDLEIRGPGEFLGARQSGAPLLRFADLTTDTLLLDW 677
            + + A+ RL  + E+ DGF IA+RDLEIRGPGE LG +Q+G    + ADL  D  L+  
Sbjct: 601 -LSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADLVRDQQLVPQ 659

Query: 678 ARELAPVMLQKHPDLAQRHIDRWLGTKAEYLKA 710
            + +A  + +++P  AQ  IDRWLG +  Y KA
Sbjct: 660 VQRIARHIHERYPQNAQAIIDRWLGERDIYAKA 692