Pairwise Alignments

Query, 710 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 1155 a.a., transcription-repair-coupling factor Mfd from Phaeobacter inhibens DSM 17395

 Score =  205 bits (522), Expect = 9e-57
 Identities = 152/443 (34%), Positives = 227/443 (51%), Gaps = 34/443 (7%)

Query: 225 AWQRIKAEELLAQQLSQLQARL-----ERAAQRAPVLPSPAEPLASSLHA--QLLAVLPF 277
           AWQ  KA+  L +++ ++  RL     ERA ++AP++  P        HA  +  A  P+
Sbjct: 544 AWQAKKAK--LKERIREMADRLIRVAAERALRKAPMMDPPP-------HAWEEFSARFPY 594

Query: 278 GLTGAQQRVGEEITRDLCREIPMHRLLQGDVGSGKTVVAALAAARAIDAGFQCALMAPTE 337
             T  Q R   E+  DL    PM RL+ GDVG GKT VA  AA  A  +G Q A++APT 
Sbjct: 595 QETDDQLRAISEVMEDLQSGSPMDRLICGDVGFGKTEVAMRAAFIAAMSGVQVAIVAPTT 654

Query: 338 ILAAQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERDEMSAAVESGEAALVIGTHAVIS 397
           +LA QH             E      ++T  +  K R+ M+     G   +V+GTHA+++
Sbjct: 655 LLARQHAAAFAQRFRGFPLEVRQLSRFVTAKEAAKTREGMA----KGTIDIVVGTHALLA 710

Query: 398 EKVRFKNLALAIIDEQHRFGVAQRLALRGKAVGELEPHLLMMSATPIPRTLAMSYYADLD 457
           + VRF+NL L IIDE+  FGVA +  L+       + H+L ++ATPIPRTL +S     D
Sbjct: 711 KSVRFQNLGLLIIDEEQHFGVAHKERLKQM---RSDIHVLTLTATPIPRTLQLSLTGVRD 767

Query: 458 VSTLDELPPGRTPIVTKLVADHRRDEVIDRIHAQIAQGRQVYWVCPLIEESEAVDLRNAT 517
           +S +   P  R  I T  V++     + + +  +  +G Q ++V P I +   V+     
Sbjct: 768 LSIIGTPPVDRLAIRT-YVSEFDAVTIREALLREHYRGGQSFYVVPRITDLPDVEAF-LQ 825

Query: 518 ETRDELTGTLGEPIQVGLLHSRMPTAEKQAVMAAFTANEIQVLVSTTVIEVGVDVPNASL 577
           E   EL+  +         H ++   +    M AF   +  VL++TT++E G+D+P A+ 
Sbjct: 826 EQLPELSYVVA--------HGQLAAGDLDDRMNAFYDGKFDVLLATTIVESGLDIPTANT 877

Query: 578 MVIEHAERFGLSQLHQLRGRVGRGAAASACVLLYAPGDSGRVGEAARARLKAMAET-GDG 636
           MV+  A+ FGL+QL+Q+RGRVGR    +   L   P      G   R R+    +T G G
Sbjct: 878 MVVHRADMFGLAQLYQIRGRVGRSKTRAYAYLTTKPRVRLTPGAEKRLRVLGSLDTLGAG 937

Query: 637 FEIARRDLEIRGPGEFLGARQSG 659
           F +A +DL+IRG G  LG  QSG
Sbjct: 938 FSLASQDLDIRGAGNLLGEEQSG 960