Pairwise Alignments

Query, 195 a.a., Uncharacterized protein Tbd_1903 from Variovorax sp. SCN45

Subject, 371 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 32/106 (30%), Positives = 53/106 (50%)

Query: 34  LLRQGKPAEALAKADTYIAGKPRDPQMRFLRGVILTEQNKQDEAIAAFTQLTQDFPELSE 93
           L+R+G P EA A  +  +A  P+  +   L G++  ++   DEA A FT+     P+L+ 
Sbjct: 116 LVRRGMPNEAAADIEAVLAASPQHARAWELAGMVAFDRGLLDEAEADFTRAITLDPDLAS 175

Query: 94  PYNNLAALYASQSKFDQARSALEQAIKLNPNYATAHENLGDVYARL 139
            Y +L A++  + + D AR     A+   P     H NLG  ++ L
Sbjct: 176 CYAHLGAVHDYKGRPDLARDVYAAALVRFPQSGELHNNLGVAFSML 221



 Score = 36.2 bits (82), Expect = 7e-07
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 10  SLAFVLLFSLWGAAHANEYDDVNTLLRQ----GKPAEALAKADTYIAGKPR-DPQMRFLR 64
           +LA +LL +L G A  +  D  +  L +    GK     A       G P  + +    R
Sbjct: 19  ALALLLLMTLSGCAARDMGDGTSPSLMERHATGKSLAPDAPGTPQRQGTPAAEAEAHLQR 78

Query: 65  GVILTEQNKQDEAIAAFTQLTQDFPELSEPYNNLAALYASQSKFDQARSALEQAIKLNPN 124
           G+    Q++ + A   F++     PE+ EP    A L   +   ++A + +E  +  +P 
Sbjct: 79  GLAYLAQDRPELAFEHFSRAASLAPEMVEPRLQRARLLVRRGMPNEAAADIEAVLAASPQ 138

Query: 125 YATAHENLGDV 135
           +A A E  G V
Sbjct: 139 HARAWELAGMV 149



 Score = 31.6 bits (70), Expect = 2e-05
 Identities = 22/102 (21%), Positives = 43/102 (42%)

Query: 35  LRQGKPAEALAKADTYIAGKPRDPQMRFLRGVILTEQNKQDEAIAAFTQLTQDFPELSEP 94
           L Q +P  A        +  P   + R  R  +L  +   +EA A    +    P+ +  
Sbjct: 83  LAQDRPELAFEHFSRAASLAPEMVEPRLQRARLLVRRGMPNEAAADIEAVLAASPQHARA 142

Query: 95  YNNLAALYASQSKFDQARSALEQAIKLNPNYATAHENLGDVY 136
           +     +   +   D+A +   +AI L+P+ A+ + +LG V+
Sbjct: 143 WELAGMVAFDRGLLDEAEADFTRAITLDPDLASCYAHLGAVH 184



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 65  GVILTEQNKQDEAIAAFTQLTQDFPELSEPYNNLAALYASQSKFDQARSALEQAIKLNPN 124
           G+ L    + DEA  AF     +    +  +NNL   +        A   L++A++L P 
Sbjct: 249 GLALCRLGRFDEAFEAFRNAGGE----AAAHNNLGYFFLVNGDASLAVQHLQRAVELEPR 304

Query: 125 -YATAHENLGDVYARLAAQ 142
            Y  A ENL    ARLAA+
Sbjct: 305 YYVRAAENL--KRARLAAR 321