Pairwise Alignments

Query, 626 a.a., Protein translocase subunit SecD from Variovorax sp. SCN45

Subject, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

 Score = 67.8 bits (164), Expect = 6e-16
 Identities = 60/262 (22%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 351 VDLTMDAKGGRIMRDVSRENYKKRMAMLIFEKGKGEVLTAPSINGELGNRFQVSGSMTVV 410
           +++ +D  GG +   +   +  K   M   +   GE ++A   +GE G R+ +   +   
Sbjct: 36  LNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVSATP-SGEEG-RWVIRYPLAAE 93

Query: 411 EANDLALLLRAGSLAAPMEIIQERTIGPTLGADNIEKGFKSVMYGFLAIMVFMCAYYALF 470
           +A  + +      ++  ++I+    +G  +G + I++G  +++   L+I+ ++   +  +
Sbjct: 94  DATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFE-W 152

Query: 471 GLFSSIALAV--NLMLLVAILSMLQATLTLPGIAAMALAIGVAIDSNVLINERVREEL-R 527
            L S   LA+  +++L++   ++ Q    L   AA+   +G +++ +++I++R+RE L  
Sbjct: 153 RLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLA 212

Query: 528 NGASPQA-----AIHAGYERAWGTILDSNVTTLIAGIALLAFGSGPVRGFAVVHCIGIVT 582
              +P A     AI A + R   T    + TTL+   AL   G  P++GFA+   IGI++
Sbjct: 213 KQQTPTADINDQAIIATFSRTMVT----SGTTLMTISALWLMGGAPLQGFAIAMFIGIIS 268

Query: 583 SMFSAVFFSRGLVNFWYGQKKK 604
             +S++     L   W G + K
Sbjct: 269 GTWSSISIGTVLPE-WLGLESK 289