Pairwise Alignments

Query, 626 a.a., Protein translocase subunit SecD from Variovorax sp. SCN45

Subject, 622 a.a., SecD/SecF/SecDF export membrane protein:SecD export membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  472 bits (1215), Expect = e-137
 Identities = 262/637 (41%), Positives = 403/637 (63%), Gaps = 50/637 (7%)

Query: 1   MNRYPVWKYTIIVIVLLVGLIYALPNFFGEAPAVQVSAAKTVVKVDASTQTRVEEALKAA 60
           +N+YP+WKY +I+ VL+VG IY+ PN + +  A+Q+S A T ++V+ +   R  +AL  A
Sbjct: 2   LNKYPLWKYVLILAVLVVGFIYSAPNLYPDDSAIQISGASTALQVNQADVDRAAKALADA 61

Query: 61  GLTPDLITL--DGTSLRARFATTDDQLKARDAVQRALVPDANDPPYTVALNLVSRSPKWL 118
           G++    +L  +G     R +  +DQL A+D V++AL  D     Y VALNL   +P WL
Sbjct: 62  GISVKASSLAENGKGGLLRLSKQEDQLPAKDVVRKALGDD-----YVVALNLARTTPTWL 116

Query: 119 TALHAFPMYLGLDLRGGVDFLLQVDMKGAIDKKAESFASDLRTTFRDKNIRGTAVSRNGQ 178
             L A PM LGLDL GGV FLL+VDM  AID + + +  ++++  R + +R  ++ + G 
Sbjct: 117 RNLGASPMKLGLDLSGGVHFLLEVDMDKAIDARLKVYEGEVKSLLRKEKVRYRSLPQLGN 176

Query: 179 TVEVSFRDAASLDAAKRLIQDQFQDLSTTDSQDGSNWRLVASIKPEAARRLQDAALKQNI 238
            +++ F D A  + A+ L++  F D   T ++      L  ++ P     +++ ++KQN+
Sbjct: 177 VIQLGFTDDAEREQARALVRKSFTDFEITPAELNGIPVLRMALTPAKLAEIREYSIKQNL 236

Query: 239 TTLHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKEILGRTATLEMRMVDESAEGR 298
           TT+ NR+NELGVAEP++Q+QG +RIVV+LPGVQDTA+AK ILG+TA LE R         
Sbjct: 237 TTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFR--------- 287

Query: 299 AAELGGGPVPFG--SEKFLDRQG-RPVI-VKKQVLVTGENLTDAQPGFDQQSNQPKVDLT 354
              LG GP      +E F  R+G RP   V++ +++TG+ +TDA+  FD+   +P+V++ 
Sbjct: 288 ---LGAGPDDSKGTTEMFEFREGGRPAAAVERGLIITGDQVTDAKASFDEHG-RPQVNIN 343

Query: 355 MDAKGGRIMRDVSRENYKKRMAMLIFE------------------------KGKGEVLTA 390
           +D  GG +M   +R N  + MA++  E                        K   ++++ 
Sbjct: 344 LDGHGGELMSRATRSNVGRSMAVIFIEQRPTTTYTRQMVDGVEKDVPVQTFKEDKKIISL 403

Query: 391 PSINGELGNRFQVSGSMTVVEANDLALLLRAGSLAAPMEIIQERTIGPTLGADNIEKGFK 450
            +I   LG++F+++G     E+++LALLLRAG LAAPM   +ERTIGP+LGADNI KG  
Sbjct: 404 ATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGID 463

Query: 451 SVMYGFLAIMVFMCAYYALFGLFSSIALAVNLMLLVAILSMLQATLTLPGIAAMALAIGV 510
           + ++G L + +F+ A Y  FGL +++ALA+N+++L+A++S+L ATLTLPGIA + L +G+
Sbjct: 464 ASLWGMLFVSIFIMAIYRFFGLIATVALALNMVMLLALMSLLGATLTLPGIAGIVLTMGM 523

Query: 511 AIDSNVLINERVREELRNGASPQAAIHAGYERAWGTILDSNVTTLIAGIALLAFGSGPVR 570
           A+D+NVLI  R+REE+ NG + Q AI+ G++RA+  ILD+N+TTL+ G  L A G+GPV+
Sbjct: 524 AVDANVLIFSRIREEIANGMTVQRAINEGFDRAYTAILDANLTTLLVGGILFAMGTGPVK 583

Query: 571 GFAVVHCIGIVTSMFSAVFFSRGLVNFWYGQK--KKL 605
           GFAV   +GI TSMF+A+  +R +VN  YG +  KKL
Sbjct: 584 GFAVTMSLGIFTSMFTAIMVTRAMVNLIYGGRDFKKL 620