Pairwise Alignments

Query, 256 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  125 bits (313), Expect = 1e-33
 Identities = 84/235 (35%), Positives = 132/235 (56%), Gaps = 30/235 (12%)

Query: 19  YKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWVARFF-LRWPATVYV 77
           Y  L  QGAW+T+++T    L+GS+  + +A A       A    ++RF  +R  AT Y+
Sbjct: 7   YIGLILQGAWVTVQLT----LMGSALAVVVAFA-------AGLGRLSRFMAVRALATTYI 55

Query: 78  SFFRGTPLFVQILLIHFAVMPVFIHPTSGLLIDGELARTLKQEHGALISGVVALTLNSAA 137
            FFRGT +FVQ+  ++F +      P +G+ +              L +GV+AL LN  A
Sbjct: 56  EFFRGTSIFVQLFWVYFVL------PFAGITLT------------PLQAGVLALGLNVGA 97

Query: 138 YISEVFRAGIQSISRGQFDAGRSLGFSPAQVMRYVVLPQAFRRMLPPLGNNAIALLKDTS 197
           Y +EV R  +++I R Q +A  +L  +  Q MR++VLPQA   MLP  GNNAI LLK T+
Sbjct: 98  YGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIVLPQALPLMLPTFGNNAIELLKGTA 157

Query: 198 LVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTLLRRLEIRLAR 252
           +VS I L+++ + A+ V         P+  I ++Y+VM  +++  +R LE R++R
Sbjct: 158 VVSLISLSDMTFQAQVVRAQTGSTLIPFATILLLYFVMAWLISLGMRWLERRVSR 212