Pairwise Alignments

Query, 284 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 297 a.a., nitrate ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 21/231 (9%)

Query: 55  PHYILPAPSLILRTLFDNWDSLSSALWF--------------TVKLTLLALTAAIVGGVL 100
           P   LPAPS   R L ++W+ ++   +               +++   L    A   GV 
Sbjct: 67  PESSLPAPS---RVLEESWELIAHPFYIGQGVDQGLFWHVFASLQRVALGYAMAAAVGVA 123

Query: 101 LAIAFALFKWVEIGLFPIAVILQVTPIIAIAPLILIYVSSTTAALLLCAWIVAFFPILSN 160
           L            GL PI  +L+  P +A  PL L      T + +   +I A +PI+ N
Sbjct: 124 LGTLVGQSALAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDGTPSAIFVIFITAIWPIIIN 183

Query: 161 TVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLSLIGAVVAEFT 220
           T +G+++   + +++ ++ + + ++ F  ++ P+A PY   GL+I  GLS +  V AE  
Sbjct: 184 TAVGIRNIPQDYQNVAKVLRLNSFEYFGKIMLPAAAPYIFTGLRIGIGLSWLAIVAAEML 243

Query: 221 AGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFIVFAALSRLV 271
            G      G+   I ++   + I  +  AL+ V ++G ++  + A + R V
Sbjct: 244 IG----GVGIGFFIWDAWNSSLISDIIVALIYVGIVGFLLDRLIALVGRAV 290