Pairwise Alignments

Query, 284 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  101 bits (251), Expect = 2e-26
 Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 12/229 (5%)

Query: 36  GIVIALLLIWEWTVRANNIPHYILPAPSLILRTLFDNWDSLSS-ALWFTVKLTLLALTAA 94
           G++IA L +W+    A  I   + P+   IL  L   W  +S  AL   + ++L     A
Sbjct: 40  GLLIAFLALWQAASTAGWINPAVFPSVGAILSAL---WTGISGGALLDDIAISLQRSGTA 96

Query: 95  IVGGVLLAIAFALF----KWVEIGLFPIAVILQVTPIIAIAPLILIYVSSTTAALLLCAW 150
            VG V+LAI   L     + +E  L P+  + + T  +A+ P+ ++ +    A+ +   +
Sbjct: 97  FVGAVVLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIF 156

Query: 151 IVAFFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAGLKIAGGLS 210
               FP+L +T+ G+K  DS L ++ ++Y AS    FR ++ P A+P    GL+++   +
Sbjct: 157 WATLFPLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTA 216

Query: 211 LIGAVVAEFTAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIV 259
           L+  + +E      G   G+  +++ + +  +IP+MFAA+ +++ LG+V
Sbjct: 217 LLLLIASEM----IGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLV 261