Pairwise Alignments

Query, 284 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  104 bits (259), Expect = 3e-27
 Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 9/182 (4%)

Query: 87  TLLALTAAIVGGVLLAIAFALFKWVEIGLFPIAVILQVTPIIAIAPLILIYVSSTTAALL 146
           TL+      + G+++A+    F+ +E  L P  +  Q  PI+AIAP++++ + +     L
Sbjct: 105 TLVGFVLGTLLGLVIAVGIVRFRVLEASLLPWVIASQTIPILAIAPMVVVVLGAIGLTGL 164

Query: 147 LCAWIVA----FFPILSNTVIGLKSADSNLRDLFQLYKASPWQTFRYLLAPSALPYFMAG 202
           +   I++    FFP+    V GL+SAD+   DL + Y A P Q F  L  P+ALPY  A 
Sbjct: 165 VPKAIISMYLCFFPVTVGMVKGLRSADALSMDLMRTYAARPSQVFWRLRLPAALPYLFAS 224

Query: 203 LKIAGGLSLIGAVVAEFTAGTAGKETGLASRILESSFRTEIPMMFAALLLVSLLGIVIFI 262
           +K+A   +L+GA+V E   G A    GL +R+L  S+  +   M+AAL++ + L   +F+
Sbjct: 225 MKVAIAAALVGAIVGELPTGAA---MGLGARLLAGSYYGQTVQMWAALVMAAALS--LFL 279

Query: 263 VF 264
           VF
Sbjct: 280 VF 281