Pairwise Alignments

Query, 342 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 325 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas stutzeri RCH2

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 24/315 (7%)

Query: 23  AAQAQEKVVFATNWKAQAGHGGFYQALVDGTYKKYGLDVDIQ--QGGPMVNNRPMLPAGK 80
           +A A +KV +  +W         Y  +  G +   G+DV+I   +GG  V  +  L    
Sbjct: 18  SALAADKVRWLNDWLPAGDKAAIYLGVEQGLFAAEGIDVEIASARGGSDVVTK--LATNS 75

Query: 81  VDFLMTG--NLLQSFDNVKNGVPTVVVAAFFQKDPQAMFAHPGQGFDTFKDMTKAPVAFI 138
            DF   G  +LLQ+    +  VP V VA  + K P A F   G G ++FKD+    VA  
Sbjct: 76  ADFGSAGLASLLQA--KAQGEVPVVAVAPIYNKQPDAFFTTEGSGIESFKDIVGKTVATP 133

Query: 139 GKDGQFSFWQWMKSEHGFKDSQLKPYTFNVG---PFLA-DKKSIQQGYAISEPLSIKAQA 194
                   W  +   +G   + +K    + G   P LA  K      +    P  ++A  
Sbjct: 134 TFSASNVVWPLLLERNGIDPASVKLLKLDPGALAPMLATGKVDATINWLTVAPGFVRALG 193

Query: 195 GFDPVVQLL--ADNGFSTYATTIETRADLIKNKPETVRKFIEASIIGWNNYLYGDNKAA- 251
             D  ++ +  ++ GF  Y  ++      ++  PE  +KF++A      N +     AA 
Sbjct: 194 EADKTLKTIPWSEYGFEGYGLSLVASQRFVQRHPEVAKKFVKAYQQAQKNAIADPAAAAA 253

Query: 252 --NELIAKTNPDSPIATLQGSIELMKKMGIVDSGESLTKGIGAMDEARVKDFYDKMVKAG 309
              +++A+ +          S+ LM+      +  S  +G G  D  R+   ++ + KA 
Sbjct: 254 ALKKMVAEVDEQQAEEQFAASVPLMQ------NEISAAEGTG-FDAKRLATTWEWVAKAQ 306

Query: 310 LYKAGEVDLSKVVTT 324
             +   +D +  + T
Sbjct: 307 GMQIDSLDPASAIDT 321