Pairwise Alignments

Query, 455 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 430 a.a., conserved hypothetical protein, with a conserved domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 83/329 (25%), Positives = 128/329 (38%), Gaps = 54/329 (16%)

Query: 173 GNRVRKITANGDVTTFAGDGKFE--------TINGN--------GGVAS--FNALTAIAL 214
           GNR++ I    +VTT   DG F+        TI+G+        G +AS  F  +  IA 
Sbjct: 103 GNRIKVIVDGKEVTT---DGTFKYEQAQNVSTISGSASKDGNDDGDLASAKFKYMWGIAA 159

Query: 215 APSGDLYAAEFSGNRIRRITPAADVTT-----FLGTNTAGSVDGNAATA-----SFTGPI 264
             +  + A +    R+R I+   +  T     F G   A + D     +     + T  +
Sbjct: 160 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYV 219

Query: 265 AMTVDGAGNLYLAELNTSLIRKITPAGDVET------LAGSGGFG-------------YA 305
            M   G     + +L ++   KI      ET      +  +  FG               
Sbjct: 220 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL 279

Query: 306 EGTGSAASFYRPYGIAVDAAGDIFVADSENNRIRRVK-GRVVTTFAGSGAPGAA-DGEAL 363
           E +GS  +   PY I      + +++D   + + ++        F GS       DG   
Sbjct: 280 ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLRE 339

Query: 364 SATFNRPGGLAFDTAGNLYVADTSNSI-LRKITP-QGVVSTVAGQAGVMGSQNGIGSAAT 421
            A F +P G+  D  GN Y+ D      LRK+    G VSTVAGQ  V    +G    AT
Sbjct: 340 EALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEAT 399

Query: 422 FSQPSGVAVAADGTIYVADTLGNRIRKIA 450
           F+ P  +    +G  ++A+  G  IRK A
Sbjct: 400 FNYPYDICYDGEGGYWIAEAWGKAIRKYA 428



 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 4/148 (2%)

Query: 143 LDGKGTAATFADPFGIVIDKNGGLIVSDVAGNRVRKITANGDVTTFAGDGKFETI-NGNG 201
           L+  G+  T   P+ I    +    +SD   + V KIT +G+   F G    +T+ +G  
Sbjct: 279 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLR 338

Query: 202 GVASFNALTAIALAPSGDLYAAE-FSGNRIRRITPAAD-VTTFLG-TNTAGSVDGNAATA 258
             A F     + +   G+ Y  + F G  +R++      V+T  G  + A  +DG    A
Sbjct: 339 EEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEA 398

Query: 259 SFTGPIAMTVDGAGNLYLAELNTSLIRK 286
           +F  P  +  DG G  ++AE     IRK
Sbjct: 399 TFNYPYDICYDGEGGYWIAEAWGKAIRK 426