Pairwise Alignments

Query, 218 a.a., Probable lipoprotein YiaD from Variovorax sp. SCN45

Subject, 224 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  118 bits (296), Expect = 8e-32
 Identities = 76/213 (35%), Positives = 119/213 (55%), Gaps = 6/213 (2%)

Query: 2   KKFVLATVA-TALVLSGC--AGGMTDTQRNTGI--GAGVGALGGAAIGAATGGRTGVNTG 56
           +K V A +A + L +S C      T+  +N     GA +GA+ GAAIG A+  ++    G
Sbjct: 5   QKLVAAILAGSTLFISACQTTNPYTNESQNAKATNGAIIGAIAGAAIGVASSSKSDRGKG 64

Query: 57  LVVGAAAGALGGYLWSQRMENQKRQMEAATQGTGIAVTQTPNNELKLQIPSDVSFDVGRA 116
            ++GAA+GA  G      M+ Q+ ++    Q TG++VT+  +N + L +P++V+F V ++
Sbjct: 65  ALIGAASGAAVGGGIGYYMDVQEAELRKQLQSTGVSVTRNGDNII-LNMPNEVTFGVDQS 123

Query: 117 NIKSNFAPVLDQFANGLRSNPNAEVRIIGHTDSTGSDAINNPLSVERAASTRDYLVARGV 176
            + S    VLD  A   +      + ++G TDS+GS++ N  LS  RAA   +YL++R +
Sbjct: 124 VLSSRAKNVLDSVALVAKEYDETMLNVMGFTDSSGSESYNLRLSQVRAAEVANYLMSREI 183

Query: 177 NPGAFRIEGRGSREPIADNNSDSGRAQNRRVEI 209
                   G G   PIADN++  GRAQNRRVEI
Sbjct: 184 KSQRISSVGMGESRPIADNSTQQGRAQNRRVEI 216