Pairwise Alignments

Query, 184 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)

Query: 13  TRELHHLLKEPLQRAHASLGSDALLDVLREA----------------HMLVQPRRAYHKT 56
           T +L+ L+++  +++  SLG+  ++  LR+                  +    R AY  T
Sbjct: 23  TLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLVRKIMHRLRLKATQRCAYKVT 82

Query: 57  TDSHHRFCLHPNLLKDGPSQVRPTGSEQVWVADITYLPTNRRFVYLSLVTDAWSRKIVGH 116
           T   H   +  NLL        P  + QVW  D+TYL T   ++YL++V D +SR+IVG 
Sbjct: 83  TQRKHSDAVADNLLN---MNFNPVSANQVWAGDVTYLKTGEGWMYLAVVMDLYSRRIVGW 139

Query: 117 HVHDR 121
            +  R
Sbjct: 140 RIDKR 144