Pairwise Alignments

Query, 297 a.a., Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) from Variovorax sp. SCN45

Subject, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

 Score =  258 bits (660), Expect = 9e-74
 Identities = 133/294 (45%), Positives = 192/294 (65%), Gaps = 13/294 (4%)

Query: 3   IYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESIFNIPIFGSVKE 62
           I ++++T+ I QGITG  G+FHT+   E    K   +AGV P K G+ ++ +P++ +V E
Sbjct: 2   ILLDENTRAIVQGITGNQGRFHTKNMLEC---KTNLLAGVTPGKGGQDVYGVPVYDTVLE 58

Query: 63  AASQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMKAKEAAG 122
              +  A  S+I++P      A +EA++A ++L   ITE IP++D +++         A 
Sbjct: 59  TVEKYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDI--------VAY 110

Query: 123 GKK--TLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAQLTEIGLG 180
           GKK    ++GPN PGL +P   K+GI+P  I ++G IG+VSRSGTLTYE  +QLT    G
Sbjct: 111 GKKHGVNIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYG 170

Query: 181 QSSAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKENMKKPVV 240
           QSS VGIGGDP+ GL++I+V++ F +DP+TDAV+M+GEIGG  E DAA+     MKKPV+
Sbjct: 171 QSSCVGIGGDPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVI 230

Query: 241 GFIAGVTAPPGKRMGHAGALISGGADTADAKLSIMEECGFTVTRNFSELAKLLK 294
            +IAG +AP GKRMGHAGA+I  G  TA +K+  +E  G  V +  S++  LLK
Sbjct: 231 SYIAGQSAPEGKRMGHAGAIIEKGVGTAKSKMQALENAGAHVAKRISDIPLLLK 284