Pairwise Alignments

Query, 300 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 87/302 (28%), Positives = 139/302 (46%), Gaps = 35/302 (11%)

Query: 5   IALPATSKNSLFSFVALFLGAAAL--ALGGVFLRH--SELPPTASAVYRVALAIPIFFLL 60
           IALPA          AL +GA +L  A+ GV +R    E+ P     +R   ++   +LL
Sbjct: 4   IALPAVVAG------ALLMGANSLVAAMDGVIVRFVAGEVHPIGIVFFRNLASLIALYLL 57

Query: 61  DMLAARSEP---AQPAERRPLIPVKLILVGFIFSGNLALYHWSMTLTTLANSNLLANLAP 117
             L  R  P   AQ + R     V  I         +A +  ++T   LA++  +A   P
Sbjct: 58  --LCRRGFPLGIAQSSGRAMHFSVHAIRAVIKLLALVAAFI-AVTEIPLASATAIAFTMP 114

Query: 118 IFVVLGSNLFLGKKFNSGFLFGMLFALAGAFILI---GHRLDFGSSYMAGNLLGLLTAVF 174
           +FV LGS LFLG++F++  +FG++   AG  I++         G+++   + +GL     
Sbjct: 115 LFVALGSVLFLGERFSAARVFGLVAGFAGILIVVRPGAATFQSGAAWALASAVGLAIV-- 172

Query: 175 YGSYLLAVSLVRSNYRTMTVMAWSSVGTLIVLLPITLLRGESLVPHTLHGMLMLLALALI 234
             + L+ VS  R +  +   +AW +   L+V +P+  +     +P      L  LAL  +
Sbjct: 173 --ALLMKVSAEREDPLS---IAWLN---LLVTVPVAFVMA---LPFWQTPSLFSLALMTL 221

Query: 235 SHVGG---QGLIAYALAKLPAALSSITLLIQPVIATVLGAYLFHEYLSVTEFVGGVIILV 291
             +GG   Q   A A+    A+L  I   I+  IA +LG  LF E + +   +GG IIL 
Sbjct: 222 QGIGGLFAQLSFARAMKLADASLLVIVDFIRLPIALILGLVLFGEPIRLEVVIGGAIILG 281

Query: 292 GI 293
            I
Sbjct: 282 AI 283