Pairwise Alignments

Query, 227 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  120 bits (302), Expect = 2e-32
 Identities = 67/197 (34%), Positives = 108/197 (54%), Gaps = 1/197 (0%)

Query: 15  PLLLEGAWTTVQLSFLATVLGFALGTVCALGRNSKHGWLRGLT-GGYVEAIRNTPLLIQS 73
           P +++  + T++++ ++ +L   +  +    R         L    YVE  R TPLLIQ 
Sbjct: 11  PFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQL 70

Query: 74  YFLIFGLSSAGVTMPIMVGAVLALVVNIGAYSCEIIRAGIESIHKGQLEAAECLGLSKVQ 133
           +F+ +GL S G+TM     AVL L +N GAY  EIIRA I+S+  GQ EAAE LG+ K++
Sbjct: 71  FFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGKIE 130

Query: 134 VFWHVILRPAVERVYPALASQFVLLMLASSIMSSIGAEELFGVANRIQSDTFRNFEIFIV 193
              +++L  A     P L + F  ++  SS++S +   EL  +   I + T R FEI++ 
Sbjct: 131 SMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFEIYLT 190

Query: 194 LWVVYLALSYAMRLGFW 210
           + ++YL L   + +G W
Sbjct: 191 IGLIYLILVSIISIGSW 207