Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 278 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 85.9 bits (211), Expect = 9e-22
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 10/251 (3%)

Query: 15  LLSALALALPLAFAGASAHADQLDTIMAAKKIRVAIDLAVPPYGLKDEKLNATGSDVETA 74
           LL+ L L L       ++    LD I     +RV +   VP + ++D++    G +++ A
Sbjct: 16  LLTGL-LGLAFTLPAVASDTPNLDAIKERGTLRVGMSTFVP-WAMRDKQGELIGFEIDVA 73

Query: 75  RLLAKSLGLELEIVPTTGANRIPFLQTDKADIVISSMSVTPEREKVVDFSVPYAAILAVV 134
           + LA   G ++E VPT     IP L   K D++I  MSVTPER K V F+ PY+     +
Sbjct: 74  KRLAADSGWQVEFVPTAWDGIIPALLAKKFDVIIGGMSVTPERSKSVLFTAPYSHSGVQL 133

Query: 135 GAPKSM----TITGPADLAGKKVIATRGTTNDQEVTKILPAGTQIVRFDDDATSITAVVS 190
            A K +    T     +    K+ A RG    Q   +  P  + +++FDDDA +   V++
Sbjct: 134 AANKKLAEGFTQLEDFNKRNVKIAARRGAFTVQVARETFPKAS-VLQFDDDAQAFQEVIN 192

Query: 191 GQADIFATAPPLLKTINEKNPAKQMEPKFTMKVNM--LAIGMRKNEPRLKAKLDEFVKAQ 248
           G A     + P  +  + K+      P F+ +++    A  +R  E   KA  D+++  +
Sbjct: 193 GNAHAVIASSPKPEHESIKHSDSLFLP-FSERLSKGNEAFAVRLGEEDKKAFFDQWIADR 251

Query: 249 LKSGELNTIYK 259
              G L   Y+
Sbjct: 252 TADGWLQARYE 262