Pairwise Alignments

Query, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 269 a.a., cysteine transport system periplasmic binding protein from Klebsiella michiganensis M5al

 Score =  132 bits (333), Expect = 6e-36
 Identities = 93/253 (36%), Positives = 141/253 (55%), Gaps = 15/253 (5%)

Query: 19  LALALPLAFAGASAHADQLDTIMAAKKIRVAIDLAVPPYGLKDEKLNA-TGSDVETARLL 77
           +ALAL +    A A ADQL  I AA  ++VA   A PP+G  D K +   G DV+ A  L
Sbjct: 8   IALALGMLVLAAQAQADQLADIKAAGVVKVATFDANPPFGSVDPKTHKIVGYDVDFAEAL 67

Query: 78  AKSLGLELEIVPTTGANRIPFLQTDKADIVISSMSVTPEREKVVDFSVPYAAILAVVGAP 137
           AKSLG++LE+V T  ANRIP LQ+ KAD++++ +++TPER +V+DFS PY     V G  
Sbjct: 68  AKSLGVKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDFSTPY----FVTGQQ 123

Query: 138 KSMTITGP---ADLAGKKVIATRGTTNDQEVTKILPAGTQIVRFDDDATSITAVVSGQAD 194
             +    P    D +  ++ A +GTT +Q + +  P  ++++ +DD   ++TA+ +G   
Sbjct: 124 FLVPAKSPDKLDDYSKARIGAVKGTTGEQALHQRFPQ-SRVLSYDDIPLALTALRNGNVQ 182

Query: 195 IFATAPPLLKTINEKNPAK---QMEPKFTMKVNMLAIGMRKNEPR-LKAKLDEFVKAQLK 250
                  +L  +  + P K   ++ P    K   + +G++K EP  LKA  DE VK + K
Sbjct: 183 AITQDSTILAGLLAEAPDKANFKIIPDLLSK-EEIGVGVKKGEPTLLKAVNDELVKLE-K 240

Query: 251 SGELNTIYKKFHG 263
           SGE   IY  + G
Sbjct: 241 SGEAAKIYDVWFG 253