Pairwise Alignments

Query, 987 a.a., DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) from Variovorax sp. SCN45

Subject, 651 a.a., DNA topoisomerase III from Klebsiella michiganensis M5al

 Score =  286 bits (731), Expect = 4e-81
 Identities = 198/637 (31%), Positives = 319/637 (50%), Gaps = 35/637 (5%)

Query: 5   LVIAEKPSVAQDIVRALTPVAGKFDKHDEHFENDSYVVTSAVGHLVEIQAPEEFDVKRGK 64
           L IAEKPS+ + I   L     K D + E    +  VVT  +GHL+E   P+ +D +  +
Sbjct: 3   LFIAEKPSLGRAIAEVLPKPHRKGDGYIEC--GNGQVVTWCIGHLLEQAQPDVYDARYAR 60

Query: 65  WSFANLPVIPPHFDLKPVDKTKTRLNAVVKQAKRKDVTQLINACDAGREGELIFRLIEQY 124
           W+  +LP++P  + L+P      +LN + +     D  ++I+A D  REG+L+   +  Y
Sbjct: 61  WNLLDLPIVPEKWQLQPKPSVTKQLNVIKRLLG--DAQEVIHAGDPDREGQLLVDEVLDY 118

Query: 125 AGGKSGLNKPVKRLWLQSMTPQAIRDGFDALRTEKQMQGLADAARSRSEADWLVGINGTR 184
                   + V+R  +  + PQA+    + LR   +   L  +A +R+ ADWL GIN TR
Sbjct: 119 LQLAPEKRQQVQRCLINDLNPQAVERAINRLRANSEFVPLCVSALARARADWLYGINMTR 178

Query: 185 AMTAFNSRDGGFFLTTVGRVQTPTLSVVVEREEQIRKFVSRDYWEIHGTFAAEAGEYPGK 244
           A T      G   + +VGRVQTP L +VV R+E+I  FV++D++++         E    
Sbjct: 179 AYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPKDER--- 235

Query: 245 WFNPDWKKANAPLLANGEPDPEQRADRVWNEQEARAIADAARGKPATVTE-ESKPTTQAS 303
            F   W  + A      EP  ++   R+ +   A  +     G+PATVT    K  ++ +
Sbjct: 236 -FVATWVPSEA-----CEPYQDEEG-RLLHRSLAEHVVKRIEGQPATVTAYNDKRDSEPA 288

Query: 304 PMLFDLTSLQREANGRFGFSAKTTLALAQSLYERHKALTYPRTDSRALPEDYLPVVKDTM 363
           P+ F L++LQ EA  RFGFSA+  L + Q LYE HK +TYPR+DSR LPE++        
Sbjct: 289 PLPFSLSALQIEAAKRFGFSAQNVLDICQKLYETHKLITYPRSDSRYLPEEHFA----GR 344

Query: 364 GMLANSGMKHLAPFAKQAVDGNYVRPNKRIFDNAKVSDHFAIIPTLQAPS-GLSEAEQKL 422
             + N+   H A    Q V    +R   R +D+ KV  H AIIPT ++    LS+ E+K+
Sbjct: 345 HAVLNAISVHAADLLPQPVVDPEIR--NRCWDDKKVDAHHAIIPTARSSQVKLSDNEEKV 402

Query: 423 YDFVVRRFLSVFFPSAEYQVTTRISTVEQGGKKYPFRTDGKVLVKPGWLAIYGKEAQDDE 482
           Y  + R++L  F P A ++   +I      GK   F    + L + GW  + G +    E
Sbjct: 403 YGLIARQYLMQFCPDAVFR-KCQIDLDIANGK---FVAKARFLAEAGWRTLLGNK----E 454

Query: 483 KEDDKDGKRLVPVKPGEIVKTESADTKGLKTRPPARYSEATLLGAMEGAGKTIDDDELRE 542
           ++++ DG  L  V   + +  E  +    +T+PP  +++ATLL AM G  + + D +L++
Sbjct: 455 RDEENDGMPLPVVAKDDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKK 514

Query: 543 AMQ-EKGLGTPATRAATIEGLITEKYMLREGRELIPTAKAFQLMTLLRGLGVEELSKAEL 601
            ++   GLGT ATRA  IE L    ++ ++GR +  T     L   L     E  ++ ++
Sbjct: 515 ILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSL----PEMATRPDM 570

Query: 602 TGEWEYKLAQMEKGALSRDAFMREIAQMTEHIVKKAK 638
           T  WE  L Q+ +       FM+ +      ++ +A+
Sbjct: 571 TAHWESILTQISEKQCRYQDFMQPLVGTLFQLIDQAR 607