Pairwise Alignments

Query, 312 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 1e-38
 Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 4   RRLNPPLNLLRAFSTVVRFGGVSRAAEALHLTQGAVSKQVQELERWIGAPLFERNRKRLA 63
           RRL PPLN L+ F    R    +RAAE L +TQ AVS Q++ LE ++G  LF R  + L 
Sbjct: 3   RRL-PPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLL 61

Query: 64  LTPAGERYEKAVRALLAQLEAATLELITSGDGGGALHLSTLPTFGAKWLIPRLPDFQRAH 123
           LT  G+ Y   ++ + + L  AT +L+   +  GAL +S  P+F  +WL+PRL DF +  
Sbjct: 62  LTEEGQSYFLDIKDIFSSLAEATDKLLERSE-KGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 124 PQITLHFVPFVHGYDFERPELDCAILFGDGHWPGAQSHYLAGQD-VALIAPRAAQAEVAI 182
           P I +              ++D AI +G G WPG ++  L  +  + L +P        +
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPGLRADKLYQEFLIPLCSPALLLGNKPM 180

Query: 183 RTPQDVARCTLLRHVTVPQSWLQWSETHGVRGLDPLAGPQFDQFQTMIRAVMVGMGVALV 242
               D+A  TLL H T  + W Q+++ +G+  ++   GP F     +++A   G GVAL 
Sbjct: 181 EKLSDLAYHTLL-HDTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALG 239

Query: 243 PRCLVQDEISSGLVDEPLPGGGYRGNEGYWFCYPEGRGQLATLDHFRSWLL 293
              L Q EI +G +  P        N  Y  C+ E +  +  +  FR W+L
Sbjct: 240 NNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCH-EKQADMGRIATFRDWML 289