Pairwise Alignments

Query, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

Subject, 937 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  195 bits (496), Expect = 9e-54
 Identities = 224/844 (26%), Positives = 332/844 (39%), Gaps = 78/844 (9%)

Query: 31  GRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIA--KSPHHFYFN 88
           GR  E   + E      P +A    + G      G+   A+    RA+A   +    +  
Sbjct: 95  GRMAEVSEVLERAGDVAPMNAVFPRMLGAHYRALGQVGAAITAARRAVAVESADGENWRG 154

Query: 89  TRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQAREAAGEATRLA 148
             AT+    G   EA + L RA     +  + +           +   AREA   A    
Sbjct: 155 LAATLLG--GAPGEALEALERAKTCGDDGADWWNIRGVALAALGEGEAAREAFKNAILRD 212

Query: 149 PQSPAAWNNAGAIDMEQ----DRLEEAVEQFRQALKLDSGYIAAHKNIGKIRAHQKDWAG 204
             +P AW N G +++      D LE AVE + QA++       AH N+ +          
Sbjct: 213 GAAPMAWTNLGNLEIRAARSADALERAVEAYGQAIRRAPDSFEAHNNLAQALRDLGRRDE 272

Query: 205 ALTSLEQAQT-DPPDFEAAYLLSRALIACGRNEEAIAPMQRAMR--------HSTVEVRA 255
           AL   E+A +  P D       +  L    R +EA+A ++RA+         HS + +  
Sbjct: 273 ALVHAERAASLRPHDVTVLNTQANILRGLRRVDEAVAILERALACDGRSAETHSNLGLAL 332

Query: 256 RALSDPEAVAALYGVCAALEGAAM-----------RFDESEELYKL---ALESMPEQEAL 301
            A  D +     +   AAL    +             +  +E+  +   AL   P    L
Sbjct: 333 LAAQDRQRAEEHFRKAAALAPDCVDIIVNLACFLIHINAGKEVLGVLEPALARFPGDVGL 392

Query: 302 LNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAEFEQCLR 361
           L  LG   F++  Y+    V +  L   P  V AR +LGV     G+   ++A  +    
Sbjct: 393 LATLGLHYFQENAYEDCATVFETVLAKKPDHVEARASLGVVRWSQGRLVESLALAQSIRE 452

Query: 362 DDPDFMPAMVWLLGEKAHIARWEGVPELRA------KIAARLDNPVDDQTASSFILMSNY 415
           D P+ +  + +LLG   H    E    L        K   R+          SF  +   
Sbjct: 453 DFPEDIRTL-FLLG-CVHSDLMENASALEVFDLAVEKGGERVPPFHYSNCCFSFHYVEAM 510

Query: 416 DDAHRLMHWTQRSATLADRNTAIKPFADAGARRTSPRIRVGYYSFDFRNHPVAHLTAELY 475
           +         +  A      T +        R    R+R+GY S DFR H VA+    L 
Sbjct: 511 EKDDLFARHRRWDALYGAGATELSDVTHHNTRDPERRLRIGYVSPDFRRHSVAYFFLPLV 570

Query: 476 SLHDRKDFEVFVYSYGPDDGHPARARIAASAEHFVDMHGQSIQQMAERIREDEIDILVDL 535
             HDR   EV  YS            I    + + D+     ++ AER+REDEIDILVDL
Sbjct: 571 GAHDRAAVEVTCYSLSTLTDQMTDL-IREGCDRWRDITTLPAEKAAERVREDEIDILVDL 629

Query: 536 SGDTRGAKPQVMAYHTAPAQLMWLGYMGTSGSTNYDYLVSDGFLSPQGT-EDCYTEKLLR 594
           SG T      + A   AP Q+ +LGY  T+G +  DY ++DGF  P G  ED  +E L R
Sbjct: 630 SGHTANNGLSIFALKPAPVQVTYLGYPNTTGLSAIDYRLTDGFADPLGVDEDPASETLWR 689

Query: 595 LPETFQVIDTKRPVNPHKATREAHGLPEDA---------FVLCNFSQSFKIQPETFDAWV 645
           LP +F + D            E  GLP+ A             +F+   K+       W 
Sbjct: 690 LPRSFLLFD------------EVPGLPDPAPPPVLSRGTITFGSFNNMAKVNRGCVAVWK 737

Query: 646 RIVRGIPNSVLWLAQGPNGFERNLRA--------HWEKAGLPAERLIVSP-RMPVDQHLA 696
           RI+  +P S L L     GF     A         W   G+  E++  +P    + +H+A
Sbjct: 738 RILDAVPGSRLLLK--AKGFRDPATAKVLIERLIDW---GVDPEQVSYAPYAKNLMEHVA 792

Query: 697 RIGLADLFIDTFPYSSGATANDVLWSGVPLLALTGSTMVSRMAGSLLGAIGLPE-LVATN 755
                D+ +DTFPY+   T  + L  GVP++ L G     R+  S+LG +GL + L+  +
Sbjct: 793 VYAEVDIALDTFPYNGTTTTFEALHMGVPVIGLRGHRHSGRVGASILGNLGLADRLLGED 852

Query: 756 HAEYVQKAIHYATHPDELAALRARLAAAKEARRGYFDTPRFVRHLEDGFRQIAARSREGL 815
             + V KA+  A   + L  +RA L     A     D P FV  LE  +R +  R   G 
Sbjct: 853 VDDMVAKAVALAGDLEGLMRMRAGLRERLRA-SPLQDGPGFVADLEGAYRAMWRRWCAGP 911

Query: 816 PTAH 819
           PT H
Sbjct: 912 PTFH 915



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 6   LAPAPTASADEASRLLEQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQG 65
           L PA      +   L   GL   +   + +   ++E +L++ P+H +A    G   + QG
Sbjct: 379 LEPALARFPGDVGLLATLGLHYFQENAYEDCATVFETVLAKKPDHVEARASLGVVRWSQG 438

Query: 66  R 66
           R
Sbjct: 439 R 439