Pairwise Alignments

Query, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 65/309 (21%), Positives = 125/309 (40%), Gaps = 14/309 (4%)

Query: 58  GEALYRQGRPKLALNYVNRAIAKSPHHF-YFNTRATIFMHMGLLAEAQQDLRRAIKALPN 116
           G  LY QG    +++  N A+ ++P     +  +    + +G+  E+ +   +A+   P 
Sbjct: 32  GLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPE 91

Query: 117 YPEAYVNLSAVYRQQKKFRQAREAAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFR 176
             EA+  L  V  +   +++A E   ++  +  ++  AW N G       R  EA++ F 
Sbjct: 92  NSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFD 151

Query: 177 QALKLDSGYIAAHKNIGKIRAHQKDWAGALTSLEQAQTDPPDFEAAYL-LSRALIACGRN 235
           +++ +++       N G+ +    ++  ++ S  +A       E A L    + +     
Sbjct: 152 KSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNY 211

Query: 236 EEAIAPMQRAMRHSTVEVRARALSDPEAVAALYGVCAALEGAAMRFDESEELYKLALESM 295
           E AI     A       +  ++   P   A  Y      E A   +DE       ALE  
Sbjct: 212 ESAIECFNTA-----ETINPKSEYPPYYKADAYRDTENFEYALKYYDE-------ALEIN 259

Query: 296 PEQEALLNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMAGQSEAAIAE 355
           P    +L + G    +   Y AAI     A++L P+ V      G +YV     E++I+ 
Sbjct: 260 PSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISC 319

Query: 356 FEQCLRDDP 364
           +++ L  +P
Sbjct: 320 YKKALEIEP 328



 Score = 37.0 bits (84), Expect = 2e-06
 Identities = 41/209 (19%), Positives = 82/209 (39%), Gaps = 17/209 (8%)

Query: 23  QGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIAKSP 82
           +G+T + M R++EA+  ++  +S   +++D  +  GE  ++ G  + +++  N+A+    
Sbjct: 133 KGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKAL---- 188

Query: 83  HHFYFNTRATIFMHMGLLAEAQQDLRRAIKAL---------PNYPEAYVNLSAVYRQQKK 133
                    T  +  G      Q+   AI+             YP  Y   +  YR  + 
Sbjct: 189 --LIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYY--KADAYRDTEN 244

Query: 134 FRQAREAAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFRQALKLDSGYIAAHKNIG 193
           F  A +   EA  + P +     + G    +      A+  F  A++LD   +      G
Sbjct: 245 FEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKG 304

Query: 194 KIRAHQKDWAGALTSLEQAQTDPPDFEAA 222
                 KD+  +++  ++A    P  E A
Sbjct: 305 NSYVGLKDYESSISCYKKALEIEPKNENA 333