Pairwise Alignments

Query, 829 a.a., TPR domain protein, putative component of TonB system from Variovorax sp. SCN45

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 66/319 (20%), Positives = 124/319 (38%), Gaps = 32/319 (10%)

Query: 58  GEALYRQGRPKLALNYVNRAIAKSPHHF-YFNTRATIFMHMGLLAEAQQDLRRAIKALPN 116
           G  LY QG    +++  N A+ ++P     +  +    + +G+  E+ +   +A+     
Sbjct: 32  GLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNKALLIDSE 91

Query: 117 YPEAYVNLSAVYRQQKKFRQAREAAGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFR 176
             EA+  L  V  +   +++A E   ++  +  ++  AWNN G       R  EA+E F 
Sbjct: 92  NSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAIECFD 151

Query: 177 QALKLDSGYIAAHKNIGKIRAHQKDWAGALTSLEQAQTDPPDFEAAYLLS---------- 226
           +++ +++       N G+ +     +  ++ S  +A       E A L            
Sbjct: 152 RSISINAKNSDVWYNKGESQFKLGKYQESIDSYNKALLIDEKMETALLGKGNSYLKLQNY 211

Query: 227 RALIACGRNEEAIAPMQRAMRHSTVEVRARALSDPEAVAALYGVCAALEGAAMRFDESEE 286
            + I C    E I P      +     +A A  D E                  F+++ +
Sbjct: 212 ESAIECFNTAETINPKSEYPPY----YKADAYRDTE-----------------NFEDALK 250

Query: 287 LYKLALESMPEQEALLNNLGATNFRQGRYDAAIEVLKKALELHPRQVLARCNLGVTYVMA 346
            Y   LE  P    +L N G    +   Y +AI     A++L P+ V      G +YV  
Sbjct: 251 YYDETLEINPSNADVLINKGICFDKMKNYSSAISNFDLAIQLDPKNVQIWILKGNSYVGL 310

Query: 347 GQSEAAIAEFEQCLRDDPD 365
              E +I+ +++ L  DP+
Sbjct: 311 KDYEFSISCYKKALELDPE 329



 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 61/322 (18%), Positives = 125/322 (38%), Gaps = 14/322 (4%)

Query: 22  EQGLTQHRMGRFTEALRIYENLLSQFPEHADALHLTGEALYRQGRPKLALNYVNRAIA-K 80
           ++GL  +  G + +++  Y   L + P+ A+     G +L + G    +    N+A+   
Sbjct: 30  DKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFNKALLID 89

Query: 81  SPHHFYFNTRATIFMHMGLLAEAQQDLRRAIKALPNYPEAYVNLSAVYRQQKKFRQAREA 140
           S +   FN   T+    G   +A +   +++       EA+ N        +++ +A E 
Sbjct: 90  SENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWNNKGITLTNMQRYSEAIEC 149

Query: 141 AGEATRLAPQSPAAWNNAGAIDMEQDRLEEAVEQFRQALKLDSGYIAAHKNIGKIRAHQK 200
              +  +  ++   W N G    +  + +E+++ + +AL +D     A    G      +
Sbjct: 150 FDRSISINAKNSDVWYNKGESQFKLGKYQESIDSYNKALLIDEKMETALLGKGNSYLKLQ 209

Query: 201 DWAGALTSLEQAQTDPPDFE-AAYLLSRALIACGRNEEAIAPMQRAMRHSTVEVRARALS 259
           ++  A+     A+T  P  E   Y  + A       E+A+          T+E+      
Sbjct: 210 NYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEDALKYYDE-----TLEINPSNAD 264

Query: 260 DPEAVAALYGVCAALEGAAMRFDESEELYKLALESMPEQEALLNNLGATNFRQGRYDAAI 319
               V    G+C         +  +   + LA++  P+   +    G +      Y+ +I
Sbjct: 265 ----VLINKGICF---DKMKNYSSAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYEFSI 317

Query: 320 EVLKKALELHPRQVLARCNLGV 341
              KKALEL P    A+ N+ +
Sbjct: 318 SCYKKALELDPENENAKENIDI 339