Pairwise Alignments

Query, 246 a.a., Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) from Variovorax sp. SCN45

Subject, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 43/233 (18%)

Query: 3   LIPAIDLKDGHCVRLKQGDMDQSTVFSE-----DPAAMARKWVEAGARRLHLVDLNGAFA 57
           +IP +D+K+G  V+         T F E     DP  +++ + E GA  L  +D+  +F 
Sbjct: 6   IIPCLDIKEGRVVK--------GTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFE 57

Query: 58  GKPQNHAAIKAILKEVGDDIPVQLGGGIRDLDTIERYIDDGLRYVIIGTAAVKNPGFLKD 117
            +      +K   ++V   IP+ +GGGI+ +D   + +  G   + I T+AVK P  +K+
Sbjct: 58  KRDIIIDVVKRTAEQVF--IPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKE 115

Query: 118 ACSAFGGH-IIVGLDAKDGKVATD--------------------------GWSKLTGHEV 150
           A   FG   ++V +D K  K  TD                          G  + TG + 
Sbjct: 116 ASEIFGTQCVVVAMDVK-RKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDA 174

Query: 151 ADLGKKFEDYGVESIIYTDIGRDGMLSGINIEATVRLAQALTIPVIASGGLSN 203
            +  KK E  G   I+ T +  DG   G ++  T  +++   +P+IASGG  N
Sbjct: 175 IEWAKKVEYLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGGCGN 227



 Score = 37.4 bits (85), Expect = 3e-07
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 2/95 (2%)

Query: 126 IIVGLDAKDGKVA--TDGWSKLTGHEVADLGKKFEDYGVESIIYTDIGRDGMLSGINIEA 183
           II  LD K+G+V   T+        +  +L K + + G + +++ DI        I I+ 
Sbjct: 6   IIPCLDIKEGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRDIIIDV 65

Query: 184 TVRLAQALTIPVIASGGLSNMADIDQLCAVESDGI 218
             R A+ + IP+   GG+  + D  ++    +D I
Sbjct: 66  VKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKI 100