Pairwise Alignments

Query, 279 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (325), Expect = 5e-35
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 4/270 (1%)

Query: 7   RNTSRYWHVPDLPGMDMLHADFTTHEYAPHVHHSFVIAVTEVGGAEFKSRGRTDIAHQQA 66
           +  +++    +  G+++L A + T  ++ H H  + + V E G   F   G   IA Q +
Sbjct: 10  KEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69

Query: 67  LLVFNPSEPHSGRMGGSSRWRYRAFYLAEPGIRHLLTTLGIDQ-TRYFMSNILGDRELIA 125
           +++ N  E H+G       W Y+A Y        +   +G +    YF   ++ D EL +
Sbjct: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELAS 129

Query: 126 SFLELHRAFDGHREQWDALRQQELFVHSFGSLFQSHGQAGQRVLGVPADAQVLAPVLELL 185
              +L   F+   +  + L ++ L   S   L   HG+   +     +  + L  V E L
Sbjct: 130 ---QLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFL 186

Query: 186 HDAFAERLTLEQMAAAADLTPFQLIGAFNRTIGLTPHTYLTQLRLRAAIAQLAAGRPLIE 245
            D     ++LE++A  A L+PF L+  F +  GL PH Y  Q RLR A   L  G  + E
Sbjct: 187 DDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISE 246

Query: 246 AAIASGFYDQSALTKHFKRTFGMTPLQYVR 275
            A   GF+DQS L +HFK+  G+TP QY R
Sbjct: 247 TAQECGFHDQSHLHRHFKKALGITPKQYAR 276