Pairwise Alignments

Query, 279 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 96.3 bits (238), Expect = 6e-25
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 3/252 (1%)

Query: 19  PGMDMLHADFTTHEYAPHVHHSFVIAVTEVGGAEFKSRGRTDIAHQQALLVFNPSEPHSG 78
           P + ++ AD+    +  H H    I +   G   F  +G      Q  +++ +P E H G
Sbjct: 15  PAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDG 74

Query: 79  RMGGSSRWRYRAFYLAEPGIRHLLTTLGIDQTRYFMSNILGDRELIASFLELHRAFDGHR 138
               ++ ++ + F +    ++  L    I+Q   F   I+ D  L  S  +LH      +
Sbjct: 75  HAHSNTGYQVQVFSIEPEWLQQTLEANQIEQVIGFEQLIVQDPTLFHSLQQLHHLL--RQ 132

Query: 139 EQWDALRQQELFVHSFGSLFQSHGQAGQRVLGVPADAQVLAPVLELLHDAFAERLTLEQM 198
           +    L +  L    F  L + +    Q  +  P     LA + E +     + + LEQ+
Sbjct: 133 DNLSQLAKDCLPYQGFAPLLERYSYLKQPTVK-PLGQHNLALLKEWVLSQLDQPIRLEQL 191

Query: 199 AAAADLTPFQLIGAFNRTIGLTPHTYLTQLRLRAAIAQLAAGRPLIEAAIASGFYDQSAL 258
           A    L+P Q    F    GLTP+ +L +LRL  A+  L +G+P  + A   GFYDQ+  
Sbjct: 192 AQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHF 251

Query: 259 TKHFKRTFGMTP 270
           +K FK T+G++P
Sbjct: 252 SKAFKATYGLSP 263