Pairwise Alignments

Query, 315 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 305 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  203 bits (516), Expect = 5e-57
 Identities = 109/310 (35%), Positives = 181/310 (58%), Gaps = 17/310 (5%)

Query: 1   MPAISFQSVSKTYPPSKQQKAQGKQGLKAVDEVSFQIEPGEFFGLLGPNGAGKTSLISML 60
           M A+  + + KTY            G +A+  +S Q++ G+F+ LLGPNGAGK++ I ++
Sbjct: 1   MYALEIEQLRKTYAG----------GFEALKGISLQVKKGDFYALLGPNGAGKSTTIGII 50

Query: 61  AGLSRPTSGTVSVHGFDVQRDYAEARRQLGIVPQELVFDPFFNVRESLRIQSGYFGIKNN 120
           + L   TSG V+V G+D+      A+++LG+VPQE  F+PF  V + +  Q+GY+G+   
Sbjct: 51  SSLVNKTSGKVTVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKA 110

Query: 121 EAW--IDELLQSLGLADKATANMRQLSGGMKRRVLVAQALVHKPPVIVLDEPTAGVDVEL 178
            A     + L  L L +K +   R LSGGMKRR+++A+AL+H+P +++LDEPTAGVD+EL
Sbjct: 111 LAKERAKKYLTQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIEL 170

Query: 179 RQTLWQFVARLNKQGSTVLLTTHYLEEAEALCSRIAMLKLGKVIALARTGDLLKAASSNV 238
           R+++W+F+ ++N QG T++LTTHYLEEAE LC  I +++ G++I       LL       
Sbjct: 171 RRSMWEFLKQINAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVET 230

Query: 239 LRFKTDAMLP----WEIAKNARITGRIVQLPAQNAHEVEQLLAAIREAGVAVEDVEMRKA 294
                D   P      + K   + G + ++  + +  +  +   + E GV V  +  +  
Sbjct: 231 FVLDVDGNAPIAPLQGVVKQQMVEGSL-EIELEKSQGINHVFTQLTEQGVKVLSMRNKVN 289

Query: 295 DLEDVFIDLM 304
            LE++F+ ++
Sbjct: 290 RLEELFVSIV 299