Pairwise Alignments

Query, 315 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 340 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  136 bits (342), Expect = 8e-37
 Identities = 74/215 (34%), Positives = 131/215 (60%), Gaps = 3/215 (1%)

Query: 27  LKAVDEVSFQIEPGEFFGLLGPNGAGKTSLISMLAGLSRPTSGTVSVHGFDVQRDYAEAR 86
           L AV E+  Q++ G  +G LGPNG GK++ I ML GL  PT G +SV G  + +     R
Sbjct: 21  LLAVAELDLQVQKGHIYGFLGPNGCGKSTTIRMLTGLLTPTRGEISVLGMAIPQQAEALR 80

Query: 87  RQLGIVPQELVFDPFFNVRESLRIQSGYFGI--KNNEAWIDELLQSLGLADKATANMRQL 144
           R++G + Q+       +VRE+L+  +  +G+  + ++  IDEL+ +  L  +       L
Sbjct: 81  RRIGYMTQKFSLYEDLSVRENLQFIADIYGLGARESKRKIDELIDTYHLDAQRQQLAGTL 140

Query: 145 SGGMKRRVLVAQALVHKPPVIVLDEPTAGVDVELRQTLWQFVARLNKQGSTVLLTTHYLE 204
           SGG K+R+ +A A +++P ++ LDEPT+ VD + R+  W+ +  L+++G+++L+TTHY++
Sbjct: 141 SGGQKQRLGLACACINEPELLFLDEPTSAVDPQNRRDFWEQLFDLSERGTSILVTTHYMD 200

Query: 205 EAEALCSRIAMLKLGKVIALARTGDLLKAASSNVL 239
           EA+  C ++A+++ G + A      LL+A   +V+
Sbjct: 201 EAQR-CHQLAIMESGHIRAKGNPQALLEAMPLHVI 234